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WormBase Tree Display for Variation: WBVar00051051

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Name Class

WBVar00051051NamePublic_nameWBVar00051051
Other_namepas21807
haw105155
cewivar00058662
C54D2.5a.1:c.-76-2750G>A
C54D2.5a.2:c.-76-2750G>A
HGVSgCHROMOSOME_X:g.7864057C>T
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesttttcttggcagctatcataaagtgaataattctcaatgacatggcacgctattcattttcgatgtttcatgctaggaatgcacatcaggaagatgaagggttggaatgagcaatcaaaatttgttgtaaaatttagaaatttcacagtgacatactaccaaaagttttcaaatactactatatagtgtggctgaaaactctaaaaaaaaatcagagaaattgagacaaagcgagtgggacaaaagtggatgaatggaaaaatagtttttctgaggacccctattgcttcactgcgtatttgaggacaattttcagtatgtcgcataaaaagagaatggatggaagaaaaaagtggatagggataggagaataaaaataatacgagctgccccacactctctgggcccacccgaatgccgaaagctgcttgtcctcccgaaaatataaggaagaagccgatctgtcggttggtcggttggacggcgccgtcgccgtcctcgacaacgacgtaaaaaagacatcatcgacaagaaaaagtagagcagcacagggatacgggaagcaaaaatgcagaagatgagagccggagcaaaaagacg
Mapping_targetC54D2
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (33)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00080795
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-76-2750G>A
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-76-2750G>A
Intron_number2/32
MethodWGS_Pasadena_Quinlan