WormBase Tree Display for Variation: WBVar00278273

WBVar00278273 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk965
    Other_name (18)
    HGVSg: CHROMOSOME_IV:g.11982107G>A
  Sequence_details: SMap: S_parent: Sequence: ZK617
    Flanking_sequences: TTCTGGTAGATGGAATAACCAACTTGGTCT AGAATCAGTTGTTTCAACTCCAGCCAATGG
    Mapping_target: ZK617
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036970
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006759
    Transcript: ZK617.1i.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1i.1:c.13414C>T
        HGVSp: CE49956:p.Gln4472Ter
        cDNA_position: 13414
        CDS_position: 13414
        Protein_position: 4472
        Exon_number: 29/33
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1a.1:c.12532C>T
        HGVSp: CE33017:p.Gln4178Ter
        cDNA_position: 12659
        CDS_position: 12532
        Protein_position: 4178
        Exon_number: 28/33
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1g.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1g.1:c.12559C>T
        HGVSp: CE46868:p.Gln4187Ter
        cDNA_position: 12559
        CDS_position: 12559
        Protein_position: 4187
        Exon_number: 28/32
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1f.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1f.1:c.12796C>T
        HGVSp: CE46948:p.Gln4266Ter
        cDNA_position: 12796
        CDS_position: 12796
        Protein_position: 4266
        Exon_number: 27/31
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1d.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1d.1:c.11371C>T
        HGVSp: CE49926:p.Gln3791Ter
        cDNA_position: 11371
        CDS_position: 11371
        Protein_position: 3791
        Exon_number: 18/22
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1c.1:c.11872C>T
        HGVSp: CE47057:p.Gln3958Ter
        cDNA_position: 12133
        CDS_position: 11872
        Protein_position: 3958
        Exon_number: 22/26
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1h.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1h.1:c.13441C>T
        HGVSp: CE49973:p.Gln4481Ter
        cDNA_position: 13441
        CDS_position: 13441
        Protein_position: 4481
        Exon_number: 30/34
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1b.1:c.13489C>T
        HGVSp: CE33018:p.Gln4497Ter
        cDNA_position: 13489
        CDS_position: 13489
        Protein_position: 4497
        Exon_number: 30/34
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      ZK617.1e.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK617.1e.1:c.11320C>T
        HGVSp: CE44668:p.Gln3774Ter
        cDNA_position: 11320
        CDS_position: 11320
        Protein_position: 3774
        Exon_number: 17/21
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Allele confirmed by Sanger sequencing
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele