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WormBase Tree Display for Transcript: F38A5.3b

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Name Class

F38A5.3bSMapS_parentSequenceF38A5
StructureSource_exons124
74162
6491583
16521902
DB_infoDB_remarknon-protein coding RNA lec-11
DatabaseRNAcentralURSidURS0000438852
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
VisibleGeneWBGene00002274
Corresponding_PCR_productcenix:125-h6
mv_F38A5.3
sjj_F38A5.3
Corresponding_oligo_set175705_s_at
A_12_P101770
A_12_P111454
A_12_P143330
A_12_P143331
Aff_F38A5.3
GPL13394_WBGene00002274
GPL13914_F38A5.3
GPL14144_F38A5.3a_32-91_0.899_24_B
GPL14144_F38A5.3a_327-386_0.927_12_A
GPL14144_F38A5.3a_607-666_0.974_1_C
GPL19516_CGZ0020358
GPL21109_F38A5.3a
GPL3518_CE28303
GPL8304_CE_WBGene00002274_A
GPL8673_F38A5_3aP00027
GPL8673_F38A5_3aP00142
GPL8673_F38A5_3aP00235
GPL8673_F38A5_3bP00047
GPL8673_F38A5_3bP00211
GPL8673_F38A5_3bP00231
GPL9450_F38A5.3
cea2.c.28617
RNAi_resultWBRNAi00095431
WBRNAi00014529
WBRNAi00046673
WBRNAi00095428
WBRNAi00095415
Microarray_resultsSMD_F38A5.3
175705_s_at
A_12_P101770
A_12_P111454
A_12_P143330
A_12_P143331
Aff_F38A5.3
GPL13394_WBGene00002274
GPL13914_F38A5.3
GPL14144_F38A5.3a_32-91_0.899_24_B
GPL14144_F38A5.3a_327-386_0.927_12_A
GPL14144_F38A5.3a_607-666_0.974_1_C
GPL19516_CGZ0020358
GPL19516_CGZ0020359
GPL21109_F38A5.3a
GPL3518_CE28303
GPL8304_CE_WBGene00002274_A
GPL8673_F38A5_3aP00027
GPL8673_F38A5_3aP00142
GPL8673_F38A5_3aP00235
GPL8673_F38A5_3bP00047
GPL8673_F38A5_3bP00211
GPL8673_F38A5_3bP00231
GPL9450_F38A5.3
cea2.c.28617
Brief_identificationnon-coding Transcript Isoform
Last_reviewed15 Oct 2013 00:00:00WBPerson4025
Remark[131015 gw3] Converted this from a CDS isoform to a non-coding transcript isoform becuase of the retained third intron based on the RNASeq and EST data.Accession_evidenceNDBBJ113239
Curator_confirmedWBPerson4025
From_analysisRNASeq_Hillier_elegans
this isoform is based on EMBL accession BJ141062
PropertiesTranscriptncRNA
IsoformCurator_confirmedWBPerson4025
Methodnon_coding_transcript