WormBase Tree Display for Transcript: C48D1.5a

C48D1.5a SMap: S_parent: Sequence: C48D1
  Structure: Source_exons: 1 86
      429 654
      712 873
      1292 1369
      6306 6428
      7829 8130
      8185 8404
      8722 8938
      9877 10053
  DB_info: DB_remark: probable non-coding RNA
    Database: RNAcentral URSid URS000077E50C
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Visible: Gene: WBGene00008178
    Corresponding_PCR_product: cenix:231-d9
      mv_JC8.11
      sjj2_C48D1.5
      sjj_JC8.11
    Corresponding_oligo_set (18)
    RNAi_result: WBRNAi00049567
      WBRNAi00007311
      WBRNAi00053898
      WBRNAi00033790
      WBRNAi00016356
    Microarray_results (19)
    Brief_identification: non-coding Transcript Isoform
    Last_reviewed: 28 Apr 2014 00:00:00 WBPerson4025
    Remark: [061017 gw3] Extended the 3' end adding an extra exon based on C.briggsae and C.remanei homology. There is a possibility that this gene extends downstream and perhaps should be merged with JC8.11, as the protein homology extends that far, but the OST, EST and SL1 evidence for JC8.11 makes it look like a complete gene that should not be merged. Protein_id_evidence: BP:CBP14259
          RP:cr01.sctg33.wum.87.1
        Curator_confirmed: WBPerson4025
      [030722 dl] Predicted by Avril Coghlan's comparative analysis of elegans and briggsae. This prediction is supported by briggsae similarity Curator_confirmed: WBPerson1846
      [120712 gw3] Merged C48D1.5 and JC8.11 based on the RNASeq intron splice data. Curator_confirmed: WBPerson4025
        From_analysis: RNASeq_Hillier_elegans
      [140428 gw3] Converted this from a Pseudogene to a CDS. Curator_confirmed: WBPerson4025
  Properties: Transcript: ncRNA
    Isoform: Curator_confirmed: WBPerson4025
  Method: non_coding_transcript