WormBase Tree Display for Transcript: C27A2.2b
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| C27A2.2b | SMap | S_parent | Sequence | C27A2 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 123 | ||
| 164 | 366 | ||||
| 413 | 557 | ||||
| DB_info | DB_remark | non-protein coding RNA rpl-22 | |||
| Database | RNAcentral | URSid | URS0000858DD0 | ||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Visible | Gene | WBGene00004434 | |||
| Corresponding_PCR_product | cenix:182-c1 | ||||
| mv_C27A2.2 | |||||
| sjj_C27A2.2 | |||||
| Corresponding_oligo_set (27) | |||||
| RNAi_result (18) | |||||
| Microarray_results (29) | |||||
| Brief_identification | non-coding Transcript Isoform | ||||
| Last_reviewed | 08 Apr 2015 00:00:00 | WBPerson1983 | |||
| Remark | [150408 pad] Converted the former coding Isoform into this non_coding_transcript Isoform based on the rarity of the EST data supporting the novel splice event. The RNASeq splice data suggests that this variant is only seen at <0.04% frequency compared to the major splice variant. The previous annotation was a grossly truncated Isoform that is more likely to be subject to NMD or have a non-coding role. | Curator_confirmed | WBPerson1983 | ||
| Properties | Transcript | ncRNA | |||
| Isoform | Curator_confirmed | WBPerson1983 | |||
| Method | non_coding_transcript |
