WormBase Tree Display for Transcript: C25H3.6c

C25H3.6c SMap: S_parent: Sequence: C25H3
  Structure: Source_exons: 1 588
      975 1094
      1203 1273
      1416 1855
      1957 2134
      2541 3060
      3108 3179
  DB_info: DB_remark: non-protein coding RNA mdt-26
    Database: RNAcentral URSid URS0000CBFF67
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Visible: Gene: WBGene00016115
    Corresponding_PCR_product: cenix:146-h2
      mv_C25H3.6
      sjj2_C25H3.6a
      sjj_C25H3.6
    Corresponding_oligo_set: A_12_P112526
      A_12_P114134
      A_12_P118442
      A_12_P136555
      A_12_P151735
      A_12_P151736
      A_12_P151737
      A_12_P151738
      A_12_P151739
      Aff_C25H3.6
      GPL13394_WBGene00016115
      GPL13914_C25H3.6
      GPL14144_C25H3.6a_1360-1419_0.937_3_B
      GPL14144_C25H3.6a_1584-1643_0.954_1_A
      GPL14144_C25H3.6a_948-1007_0.907_15_C
      GPL19516_CGZ0006011
      GPL19516_CGZ0006012
      GPL21109_C25H3.6b
      GPL21109_C25H3.6c
      GPL3518_CE27094
      GPL8673_C25H3_6aP00310
      GPL8673_C25H3_6aP00784
      GPL8673_C25H3_6aP00931
      GPL8673_C25H3_6bP00061
      GPL8673_C25H3_6bP00147
      GPL8673_C25H3_6bP00192
      GPL8673_C25H3_6cP00001
      GPL8673_C25H3_6cP00006
      GPL8673_C25H3_6cP00012
      GPL9450_C25H3.6a
      GPL9450_C25H3.6b
      GPL9450_C25H3.6c
      cea2.c.10193
      cea2.d.07781
      cea2.p.31362
    RNAi_result: WBRNAi00106633
      WBRNAi00024623
      WBRNAi00106708
      WBRNAi00070276
      WBRNAi00070277
      WBRNAi00070275
      WBRNAi00071774
      WBRNAi00117732
      WBRNAi00110795
      WBRNAi00113054
      WBRNAi00113283
      WBRNAi00071144
      WBRNAi00008435
      WBRNAi00041230
    Microarray_results: SMD_C25H3.6
      A_12_P112526
      A_12_P114134
      A_12_P118442
      A_12_P136555
      A_12_P151735
      A_12_P151736
      A_12_P151737
      A_12_P151738
      A_12_P151739
      Aff_C25H3.6
      GPL13394_WBGene00016115
      GPL13914_C25H3.6
      GPL14144_C25H3.6a_1360-1419_0.937_3_B
      GPL14144_C25H3.6a_1584-1643_0.954_1_A
      GPL14144_C25H3.6a_948-1007_0.907_15_C
      GPL19516_CGZ0006011
      GPL19516_CGZ0006012
      GPL21109_C25H3.6b
      GPL21109_C25H3.6c
      GPL3518_CE27094
      GPL8304_CE_WBGene00016115_A
      GPL8673_C25H3_6aP00310
      GPL8673_C25H3_6aP00784
      GPL8673_C25H3_6aP00931
      GPL8673_C25H3_6bP00061
      GPL8673_C25H3_6bP00147
      GPL8673_C25H3_6bP00192
      GPL8673_C25H3_6cP00001
      GPL8673_C25H3_6cP00006
      GPL8673_C25H3_6cP00012
      GPL9450_C25H3.6a
      GPL9450_C25H3.6b
      GPL9450_C25H3.6c
      cea2.c.10193
      cea2.d.07781
      cea2.p.31362
    Brief_identification: non-coding Transcript Isoform
    Last_reviewed: 14 Sep 2017 14:42:58 WBPerson1983
    Remark: [20021017 po] made alternate form by removing last eight exons based on EST data (yk827d06.5) Curator_confirmed: WBPerson1867
      [20031027 tb] extended this single exon form, although is still 'short'. Curator_confirmed: WBPerson1849
      [20040326 db] modified start when the sequencing error was corrected Curator_confirmed: WBPerson1848
      [170914 pad] Converted this to a non_coding_transcript Isoform based on data being available that cannot be incorporated into a coding Isoform. Rare retained intron transcript, unlikely to be a valid grossly truncated coding structure. Curator_confirmed: WBPerson1983
        From_analysis: RNASeq_read
  Properties: Transcript: ncRNA
    Isoform: Curator_confirmed: WBPerson1983
  Method: non_coding_transcript