WormBase Tree Display for Transcript: F22B8.5b
expand all nodes | collapse all nodes | view schema
F22B8.5b | Evidence | Curator_confirmed | WBPerson4025 | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F22B8 | ||
Structure | Source_exons | 1 | 162 | ||
563 | 882 | ||||
1001 | 1120 | ||||
1167 | 1344 | ||||
1405 | 1492 | ||||
DB_info | DB_remark | non-protein coding RNA str-7 | |||
Database | RNAcentral | URSid | URS0000A6B89D | ||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Visible | Gene | WBGene00006075 | |||
Corresponding_PCR_product | cenix:160-a12 | ||||
mv_F22B8.5 | |||||
sjj_F22B8.5 | |||||
Corresponding_oligo_set (14) | |||||
RNAi_result | WBRNAi00045302 | ||||
WBRNAi00031263 | |||||
WBRNAi00013744 | |||||
Microarray_results | SMD_F22B8.5 | ||||
188835_at | |||||
A_12_P110827 | |||||
A_12_P167979 | |||||
A_12_P167980 | |||||
Aff_F22B8.5 | |||||
GPL14144_F22B8.5_675-734_0.930_1_A | |||||
GPL19516_CGZ0017484 | |||||
GPL21109_F22B8.5 | |||||
GPL3518_CE15883 | |||||
GPL8304_CE_WBGene00006075_A | |||||
GPL8673_F22B8_5P00290 | |||||
GPL8673_F22B8_5P00641 | |||||
GPL9450_F22B8.5 | |||||
cea2.i.37365 | |||||
Brief_identification | non-coding Transcript Isoform | ||||
Last_reviewed | 05 Jan 2016 10:58:30 | WBPerson4025 | |||
Remark | [160105 gw3] Created this non-coding transcript isoform based on the RNASeq splice data from 7044 reads spanning introns. This uses a the second intron, which is usually retained in the coding sequence. | Curator_confirmed | WBPerson4025 | ||
From_analysis | RNASeq | ||||
Properties | Transcript | ncRNA | |||
Isoform | Curator_confirmed | WBPerson4025 | |||
Method | non_coding_transcript |