WormBase Tree Display for Transcript: C43E11.2a.1
expand all nodes | collapse all nodes | view schema
| C43E11.2a.1 | SMap | S_parent | Sequence | C43E11 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 65 | ||
| 112 | 239 | ||||
| 300 | 730 | ||||
| 1298 | 1618 | ||||
| 1674 | 2130 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Visible | Gene | WBGene00016602 | |||
| Variation (42) | |||||
| Matching_cDNA | L2_Nanopore_Roach_101734 | Inferred_automatically | transcript_builder.pl | ||
| L2_Nanopore_Roach_27574 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_45530 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_61087 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_30929 | Inferred_automatically | transcript_builder.pl | |||
| OSTF031B7_1 | Inferred_automatically | transcript_builder.pl | |||
| yk847h03.3 | Inferred_automatically | transcript_builder.pl | |||
| FN906941 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_51814 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_147878 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_26485 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_74204 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_26682 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_39802 | Inferred_automatically | transcript_builder.pl | |||
| FN885330 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_144360 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_108476 | Inferred_automatically | transcript_builder.pl | |||
| yk811f04.3 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_27803 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG6513|c5_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_96517 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_33997 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_53068 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_17544 | Inferred_automatically | transcript_builder.pl | |||
| yk1555a07.3 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_173383 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_26158 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_288825 | Inferred_automatically | transcript_builder.pl | |||
| FN906798 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_155408 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_81281 | Inferred_automatically | transcript_builder.pl | |||
| OSTR031B7_1 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_66962 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_45005 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_314460 | Inferred_automatically | transcript_builder.pl | |||
| FN906940 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_30686 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_129227 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_33082 | Inferred_automatically | transcript_builder.pl | |||
| yk847h03.5 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG6513|c5_g2_i1 | Inferred_automatically | transcript_builder.pl | |||
| Corresponding_CDS | C43E11.2a | ||||
| Corresponding_PCR_product | cenix:117-d8 | ||||
| mv_C43E11.2 | |||||
| sjj_C43E11.2 | |||||
| sjj_C43E11.9 | |||||
| Corresponding_oligo_set (22) | |||||
| RNAi_result | WBRNAi00042381 | ||||
| WBRNAi00003140 | |||||
| WBRNAi00117051 | |||||
| WBRNAi00029759 | |||||
| Microarray_results (24) | |||||
| SAGE_tag | SAGE:gttcgagggc | Strand | Antisense | ||
| SAGE:ggtctcgttaggaattt | Strand | Antisense | |||
| SAGE:gctaatcgaa | Strand | Antisense | |||
| SAGE:ggtctcgtta | Strand | Antisense | |||
| SAGE:gatggaaatcgatcggc | Strand | Antisense | |||
| SAGE:aataaaaaaa | Strand | Antisense | |||
| SAGE:gtatccctgc | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:gtatccctgctttcata | Strand | Sense | |||
| Unambiguously_mapped | |||||
| RNASeq_FPKM (74) | |||||
| Properties | Transcript | mRNA | |||
| Associated_feature | WBsf014670 | ||||
| WBsf238959 | |||||
| Method | Coding_transcript |
