WormBase Tree Display for Sequence: Y6G8
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Y6G8 | DNA | Y6G8 | 33038 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (14) | ||||
CDS_child (139) | ||||||
Transcript (11) | ||||||
Pseudogene | Y6G8.1 | 3052 | 4908 | |||
Y6G8.2a:wp:205 | 9595 | 5087 | ||||
Y6G8.2b:wp205 | 9595 | 5087 | ||||
Y6G8.2c:wp205 | 9595 | 5087 | ||||
Y6G8.9 | 10643 | 11537 | ||||
Y6G8.10 | 13850 | 14610 | ||||
Y6G8.11 | 18044 | 18355 | ||||
Y6G8.12 | 16545 | 16166 | ||||
Y6G8.13 | 22643 | 22983 | ||||
PCR_product (13) | ||||||
Allele (1273) | ||||||
Oligo_set | Aff_C38D9.5 | 1993 | 2640 | |||
Aff_Y6G8.1 | 3756 | 4908 | ||||
Aff_Y6G8.2 | 5688 | 5089 | ||||
Aff_Y6G8.3 | 12803 | 13450 | ||||
Feature_object (67) | ||||||
Feature_data | Y6G8:Polysome | 1 | 33038 | |||
Y6G8:TranscriptionallyActiveRegion | 1 | 33038 | ||||
Y6G8:ChIPSeqTF | 1 | 33038 | ||||
Y6G8:TRF | 1 | 33038 | ||||
Y6G8:Dust | 1 | 33038 | ||||
Y6G8:inverted | 1 | 33038 | ||||
Homol_data (18) | ||||||
Structure | From | Source | CHROMOSOME_V | |||
Overlap_right | F57G4 | 32935 | ||||
Overlap_left | C38D9 | |||||
Clone_left_end | Y6G8 | 1 | ||||
Clone_right_end | Y6G8 | 33038 | ||||
DB_info | Database | EMBL | NDB_AC | Z92973 | ||
NDB_SV | Z92973.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Lloyd CR | ||||
From_laboratory | HX | |||||
Date_directory | 970502 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | Y6G8 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | d906025a52c1cc977b16780e3e5fb515 | ||||
Status | Finished | 02 May 1997 00:00:00 | ||||
Submitted | 18 Mar 1997 00:00:00 | |||||
Annotated | 06 May 1997 00:00:00 | |||||
Map | Sequence-V | Ends | Left | 10074 | ||
Right | 10168 | |||||
Interpolated_map_position | V | 12.9298 | ||||
Assembly_tags | Finished Left | 1 | 4 | Y6G8 | ||
Clone right end | 101 | 104 | end of C38D9 (rachael) | |||
3588 | 3591 | RH end of F40D5 | ||||
Clone left end | 616 | 619 | Is this the LH end C43A10? C43A10 DNA was used to PCR with oligos 21 and 5. This is the last GATC site before oligo 21. | |||
32935 | 32938 | |||||
annotation | 18215 | 18216 | 2 base pairs deleted from this clone | |||
28829 | 29060 | 15 copies of a tandem repeat 60 bp longof type RcC9 covering 921bp in this assembly. Digest by psti indicates that around 700bp (11 copies of the repeat) are missing. | ||||
29060 | 29163 | 15 copies of a tandem repeat 60 bp long of type RcC9 covering 921bp in this assembly. Digest by psti indicates that around 700bp (11 copies of the repeat) are missing. | ||||
29163 | 29457 | 15 copies of a tandem repeat 60 bp long of type RcC9 covering 921bp in this assembly. Digest by psti indicates that around 700bp (11 copies of the repeat) are missing. | ||||
29457 | 29750 | 15 copies of a tandem repeat 60 bp long of type RcC9 covering 921bp in this assembly. Digest by psti indicates that around 700bp (11 copies of the repeat) are missing. | ||||
Finished Right | 33035 | 33038 | Y6G8 | |||
Method | Genomic_canonical |