WormBase Tree Display for Sequence: Y51A2D
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| Y51A2D | DNA | Y51A2D | 139259 | ||
|---|---|---|---|---|---|
| SMap | S_child (12) | ||||
| Structure | From | Source | CHROMOSOME_V | ||
| Overlap_right | Y69H2 | 139160 | |||
| Overlap_left | ZK228 | ||||
| Clone_left_end | Y69H2 | 139160 | |||
| Y51A2D | 1 | ||||
| Clone_right_end | ZK228 | 104 | |||
| Y37H2 | 28891 | ||||
| Y51A2D | 139259 | ||||
| DB_info | Database | EMBL | NDB_AC | AL021497 | |
| NDB_SV | AL021497.2 | ||||
| Secondary_accession | Z99275 | ||||
| DB_remark | [121025] Sequence correction WBsf268327 : Deletion A-1 bases @ 54792 | ||||
| [121025] Sequence correction WBsf268006 : Insertion C1 bases from @ 78247 | |||||
| Keyword | HTG | ||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | |||
| Origin | From_author | McMurray AA | |||
| From_laboratory | HX | ||||
| Date_directory | 980102 | ||||
| Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00000001 | ||||
| Visible | Clone | Y51A2D | |||
| Remark | Transposon Y51A2D.6 converted into an S_Child [020208 kj] | ||||
| Properties | Genomic_canonical | ||||
| Checksum | MD5 | b932fe932a5db7d2df160df0db4c820d | |||
| Status | Finished | 02 Jan 1998 00:00:00 | |||
| Submitted | 23 Jan 1998 00:00:00 | ||||
| Annotated | 01 Jan 1980 00:00:00 | ||||
| Map | Sequence-V | Ends | Left | 10670 | |
| Right | 10686 | ||||
| Interpolated_map_position | V | 16.8627 | |||
| Assembly_tags | Finished Left | 1 | 4 | Y51A2D | |
| Clone right end | 101 | 104 | ZK228 | ||
| 28886 | 28891 | Y37H2 | |||
| Warning | 3880 | 3884 | POSSIBLY VECTOR: puc18 1927 2104 2686 | ||
| cosmid vector | 28890 | 28891 | CAF:End=Left::pYAC4 | ||
| 117094 | 117163 | ||||
| 139259 | 139210 | ||||
| 139252 | 139244 | ||||
| 139160 | 139160 | ||||
| annotation | 54792 | 54796 | one read has 5 A's, the rest have 4 A's. Edited to 5 A's | ||
| oligo | 58043 | 58026 | serial#=Y51A2-2 template=vu69h1.r1tx sequence=CAAACTTCCGTCAAATCC flags= | ||
| 117544 | 117527 | serial#=Y51A2-1 template=vu55a4.q1t Template: vu60h1.p1 Template: vu58f12 Template: vu75d5 sequence=TTCCAAAATTCTGCTGAC flags= | |||
| repeat | 34563 | 34093 | Repeats with contig vu11b1.p1, offset 217446 | ||
| 34864 | 34394 | Repeats with contig vu11b1.p1, offset 217145 | |||
| 66920 | 68336 | ||||
| Clone left end | 139160 | 139165 | Y69H2 | ||
| Finished Right | 139256 | 139259 | Y51A2D | ||
| Method | Genomic_canonical |
