WormBase Tree Display for Sequence: T28H10
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| T28H10 | DNA | T28H10 | 14915 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00199909 | 7565 | 7707 | |
| WBGene00012145 | 7540 | 6314 | ||||
| WBGene00012142 | 5049 | 6401 | ||||
| WBGene00012143 | 14204 | 11900 | ||||
| CDS_child (174) | ||||||
| Transcript | T28H10.5 | 7565 | 7707 | |||
| T28H10.1a.1 | 5056 | 6367 | ||||
| T28H10.1b.1 | 5049 | 6401 | ||||
| T28H10.2.1 | 14204 | 11900 | ||||
| T28H10.4.1 | 7540 | 6314 | ||||
| W04D2.6b.1 | 991 | 4771 | ||||
| PCR_product (12) | ||||||
| Allele (186) | ||||||
| Oligo_set | Aff_T28H10.1 | 5407 | 6451 | |||
| Aff_T28H10.2 | 13480 | 12123 | ||||
| Aff_W04D2.6 | 4044 | 4771 | ||||
| Feature_object (146) | ||||||
| Feature_data | T28H10:Polysome | 1 | 14915 | |||
| T28H10:TranscriptionallyActiveRegion | 1 | 14915 | ||||
| T28H10:ChIPSeqTF | 1 | 14915 | ||||
| T28H10:TRF | 1 | 14915 | ||||
| T28H10:Dust | 1 | 14915 | ||||
| T28H10:inverted | 1 | 14915 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | C13C12 | 14912 | ||||
| Overlap_left | W04D2 | |||||
| Clone_left_end | T28H10 | 1 | ||||
| C13C12 | 4711 | |||||
| Clone_right_end | W04D2 | 8319 | ||||
| T28H10 | 14915 | |||||
| DB_info | Database | EMBL | NDB_AC | Z75551 | ||
| NDB_SV | Z75551.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Kershaw JK | ||||
| From_laboratory | HX | |||||
| Date_directory | 960530 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T28H10 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | a931ed0a1d26ebe38ec39c9cf002a914 | ||||
| Status | Finished | 30 May 1996 00:00:00 | ||||
| Submitted | 29 Jun 1996 00:00:00 | |||||
| Annotated | 24 Jun 1996 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 7141 | ||
| Right | 7151 | |||||
| Interpolated_map_position | V | 4.42061 | ||||
| Assembly_tags | annotation | 11241 | 11683 | this region: tandem reapeat of 9 bases TAGGTAGTC. digest shows there is 7-9kb missing from this region. there is evidence of cosmid deletion. digest shows insert of about 26kb. | ||
| Clone left end | 1 | 4 | T28H10 | |||
| 4711 | 4714 | C13C12 | ||||
| Clone right end | 8316 | 8319 | W04D2 | |||
| 14912 | 14915 | T28H10 | ||||
| Finished Left | 1 | 4 | T28H10 | |||
| Finished Right | 14912 | 14915 | T28H10 | |||
| Method | Genomic_canonical |
