WormBase Tree Display for Sequence: F42D1
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F42D1 | DNA | F42D1 | 32258 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (14) | ||||
CDS_child (126) | ||||||
Transcript (16) | ||||||
PCR_product (11) | ||||||
Allele (668) | ||||||
Oligo_set | Aff_F42D1.2 | 15247 | 15903 | |||
Aff_F42D1.3 | 26237 | 27495 | ||||
Aff_Y16B4A.1 | 4893 | 6305 | ||||
Feature_object (213) | ||||||
Feature_data | F42D1:Polysome | 1 | 32258 | |||
F42D1:TranscriptionallyActiveRegion | 1 | 32258 | ||||
F42D1:ChIPSeqTF | 1 | 32258 | ||||
F42D1:TRF | 1 | 32258 | ||||
F42D1:Dust | 1 | 32258 | ||||
F42D1:inverted | 1 | 32258 | ||||
Homol_data (22) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | T04C10 | 32158 | ||||
Overlap_left | Y16B4A | |||||
Clone_left_end | F42D1 | 1 | ||||
T04C10 | 32158 | |||||
DB_info | Database | EMBL | NDB_AC | Z81081 | ||
NDB_SV | Z81081.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Lightning J | ||||
From_laboratory | HX | |||||
Date_directory | 960729 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | F42D1 | ||||
Reference | WBPaper00015364 | |||||
WBPaper00022637 | ||||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | aff0d27e43fd08b47eff5645787a83e4 | ||||
Status | Finished | 29 Jul 1996 00:00:00 | ||||
Submitted | 21 Oct 1996 00:00:00 | |||||
Annotated | 14 Nov 1996 00:00:00 | |||||
Map | Sequence-X | Ends | Left | 8018 | ||
Right | 8037 | |||||
Interpolated_map_position | X | 21.3349 | ||||
Assembly_tags | Clone left end | 1 | 4 | F42D1 | ||
32158 | 32161 | T04C10 | ||||
Finished Left | 1 | 1 | ||||
annotation | 17375 | 17375 | All evidence is that this is a T although background at this position ishigh on all clones | |||
11595 | 11603 | Only able to cover these 9 bases with a single clone as it is in the middle of a large inverted repeat and hence isnot well represented. | ||||
21451 | 21451 | Reads that travel through poly G regiondo not show a G here in all cases. Reads approaching from the other direction, however, show a very clear G | ||||
30209 | 30455 | Not able to obtain a primer read across this area, only terminator reads. | ||||
Finished Right | 32258 | 32258 | ||||
Method | Genomic_canonical |