WormBase Tree Display for Sequence: F38G1
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F38G1 | DNA | F38G1 | 24444 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00023034 | 19587 | 19658 | |
WBGene00044556 | 8333 | 10087 | ||||
WBGene00023035 | 21711 | 21640 | ||||
WBGene00202078 | 19666 | 19587 | ||||
WBGene00001185 | 21457 | 24090 | ||||
WBGene00199679 | 20216 | 20067 | ||||
WBGene00000484 | 13222 | 18276 | ||||
CDS_child (89) | ||||||
Transcript (8) | ||||||
PCR_product | cenix:134-a12 | 22328 | 22724 | |||
cenix:53-c10 | 16485 | 17132 | ||||
mv_AAD00574 | 21567 | 23932 | ||||
mv_CAB38019 | 13224 | 18203 | ||||
sjj2_F38G1.2 | 23188 | 24182 | ||||
sjj2_F38G1.3 | 8265 | 9763 | ||||
sjj_F38G1.1 | 14540 | 15616 | ||||
Allele (384) | ||||||
Oligo_set | Aff_F38G1.1 | 16931 | 18173 | |||
Feature_object (111) | ||||||
Feature_data | F38G1:Polysome | 1 | 24444 | |||
F38G1:TranscriptionallyActiveRegion | 1 | 24444 | ||||
F38G1:ChIPSeqTF | 1 | 24444 | ||||
F38G1:TRF | 1 | 24444 | ||||
F38G1:Dust | 1 | 24444 | ||||
F38G1:inverted | 1 | 24444 | ||||
Homol_data (16) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | B0310 | 23745 | ||||
Overlap_left | F52D1 | |||||
Clone_left_end | F38G1 | 1 | ||||
B0310 | 23745 | |||||
Clone_right_end | F52D1 | 15490 | ||||
DB_info | Database | EMBL | NDB_AC | FO080171 | ||
NDB_ID | _AC006635 | |||||
NDB_SV | FO080171.2 | |||||
Secondary_accession | AC006635 | |||||
DB_remark | The 5' clone is F52D1, 200 bp overlap; the 3' clone is B0310, 700 bp overlap. Actual start of this clone is at base position 1 of F38G1; actual end is at 12693 of B0310. | |||||
[121025] Sequence correction: SNP 0 bases @ 17872 | ||||||
[121025] Sequence correction: SNP 0 bases @ 20551 | ||||||
[121025] Sequence correction: SNP 0 bases @ 20576 | ||||||
[121025] Sequence correction: SNP 0 bases @ 23638 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Favello A | ||||
Wilson RK | ||||||
From_laboratory | RW | |||||
Date | 06 Oct 1995 00:00:00 | |||||
19 Oct 1995 00:00:00 | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | F38G1 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | d472d0eee7e03739233339b1642e8b0a | ||||
Status | Shotgun | |||||
Finished | ||||||
Submitted | 06 Oct 1995 00:00:00 | |||||
Map | Sequence-X | |||||
Interpolated_map_position | X | -19.7714 | ||||
Method | Genomic_canonical |