WormBase Tree Display for Sequence: C49H3
expand all nodes | collapse all nodes | view schema
| C49H3 | DNA | C49H3 | 37516 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (14) | ||||
| CDS_child (445) | ||||||
| Transcript (24) | ||||||
| Nongenomic | yk224e6 | 16485 | 18616 | |||
| yk304d9 | 11120 | 12978 | ||||
| PCR_product (46) | ||||||
| Allele (346) | ||||||
| Oligo_set | Aff_C49H3.10 | 21417 | 20361 | |||
| Aff_C49H3.11 | 29607 | 28961 | ||||
| Aff_C49H3.12 | 30785 | 30328 | ||||
| Aff_C49H3.2 | 33871 | 34896 | ||||
| Aff_C49H3.3 | 27896 | 28390 | ||||
| Aff_C49H3.4 | 19247 | 20095 | ||||
| Aff_C49H3.5 | 16602 | 17771 | ||||
| Aff_C49H3.6 | 8637 | 9714 | ||||
| Aff_C49H3.8 | 5017 | 3785 | ||||
| Aff_C49H3.9 | 12329 | 10912 | ||||
| Feature_object (605) | ||||||
| Feature_data | C49H3:Polysome | 1 | 37516 | |||
| C49H3:TranscriptionallyActiveRegion | 1 | 37516 | ||||
| C49H3:ChIPSeqTF | 1 | 37516 | ||||
| C49H3:TRF | 1 | 37516 | ||||
| C49H3:Dust | 1 | 37516 | ||||
| C49H3:inverted | 1 | 37516 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | F20D12 | 35517 | ||||
| Overlap_left | C55F2 | |||||
| Clone_left_end | F20D12 | 35517 | ||||
| C49H3 | 1 | |||||
| Y42H9 | 33103 | |||||
| Clone_right_end | C55F2 | 11943 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080908 | ||
| NDB_ID | _U42436 | |||||
| NDB_SV | FO080908.1 | |||||
| Secondary_accession | U42436 | |||||
| DB_remark | The 5' clone is C55F2, 3700 bp overlap; the 3' clone is F20D12, 2000 bp overlap. Actual start of this clone is at base position 1 of C49H3; actual end is at 7176 of F20D12. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wu X | ||||
| From_laboratory | RW | |||||
| Date | 19 Nov 1995 00:00:00 | |||||
| Date_directory | 950728 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C49H3 | ||||
| Remark | based on EST data the former C49H3.1 and C49H3.2 were combined in to one gene, C49H3.1-990211-js | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | fbf012e55fc1525d44164a5f2886e9ac | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 19 Nov 1995 00:00:00 | |||||
| Map | Sequence-IV | |||||
| Interpolated_map_position | IV | 3.49664 | ||||
| Method | Genomic_canonical |
