WormBase Tree Display for Sequence: C04F5
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C04F5 | DNA | C04F5 | 40766 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (11) | ||||
CDS_child (124) | ||||||
Transcript (12) | ||||||
Nongenomic | yk262d7 | 32513 | 37475 | |||
PCR_product (35) | ||||||
Allele (815) | ||||||
Oligo_set | Aff_C04F5.1 | 36029 | 37222 | |||
Aff_C04F5.2 | 5657 | 4336 | ||||
Aff_C04F5.3 | 9293 | 7985 | ||||
Aff_C04F5.4 | 11895 | 10719 | ||||
Aff_C04F5.5 | 14621 | 13663 | ||||
Aff_C04F5.6 | 17827 | 16426 | ||||
Aff_C04F5.7 | 19471 | 18816 | ||||
Aff_C04F5.8 | 23777 | 22210 | ||||
Aff_C04F5.9 | 26608 | 25408 | ||||
Feature_object (180) | ||||||
Feature_data | C04F5:Polysome | 1 | 40766 | |||
C04F5:TranscriptionallyActiveRegion | 1 | 40766 | ||||
C04F5:ChIPSeqTF | 1 | 40766 | ||||
C04F5:TRF | 1 | 40766 | ||||
C04F5:Dust | 1 | 40766 | ||||
C04F5:inverted | 1 | 40766 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_V | |||
Overlap_right | F14F9 | 37857 | ||||
Overlap_left | Y58A7A | |||||
Clone_left_end | C04F5 | 1 | ||||
Clone_right_end | C04F5 | 39270 | ||||
DB_info | Database | EMBL | NDB_AC | FO080342 | ||
NDB_ID | _AF101305 | |||||
NDB_SV | FO080342.2 | |||||
Secondary_accession | AF101305 | |||||
DB_remark | The 5' clone is Y58A7A, 200 bp overlap; the 3' clone is F14F9, 2910 bp overlap. Actual start of this clone is at base position 1 of C04F5; actual end is at 39270 of C04F5. | |||||
[121025] Sequence correction: SNP 0 bases @ 35350 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Latreille P | ||||
Bradshaw H | ||||||
Elliott G | ||||||
From_laboratory | RW | |||||
Date | 14 Mar 1998 00:00:00 | |||||
Date_directory | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | C04F5 | ||||
Remark | added 1014 bp to the sequence after position 33725; there was a deletion in the original submission per Pat Minx 020125 db | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 00ec5a8ed561d9a395bc4cc1d21e494f | ||||
Status | Shotgun | |||||
Finished | ||||||
Submitted | 14 Mar 1998 00:00:00 | |||||
Map | Sequence-V | |||||
Interpolated_map_position | V | -2.49933 | ||||
Method | Genomic_canonical |