WormBase Tree Display for Sequence: 3R5
expand all nodes | collapse all nodes | view schema
3R5 | DNA | 3R5 | 2698 | |||
---|---|---|---|---|---|---|
SMap | S_child | CDS_child (17) | ||||
Transposon | WBTransposon00000261 | 1993 | 1114 | |||
PCR_product | TH:322D5_1 | 1786 | 2684 | |||
TH:322D5_2 | 1786 | 2684 | ||||
TH:335A8 | 14 | 1205 | ||||
cenix:322-d5 | 1785 | 2685 | ||||
cenix:335-a8 | 13 | 1206 | ||||
mv_3R5.1.v6 | 119 | 739 | ||||
sjj_3R5.1 | 77 | 1181 | ||||
sjj_3R5.2 | 1370 | 2215 | ||||
Allele (14) | ||||||
Oligo_set | Aff_3R5.1 | 118 | 741 | |||
Feature_object (15) | ||||||
Feature_data | 3R5:Polysome | 1 | 2698 | |||
3R5:TranscriptionallyActiveRegion | 1 | 2698 | ||||
3R5:TRF | 1 | 2698 | ||||
3R5:Dust | 1 | 2698 | ||||
3R5:inverted | 1 | 2698 | ||||
Homol_data | 3R5:RNAi | 1 | 2698 | |||
3R5:wublastx_brenneri | 1 | 2698 | ||||
3R5:wublastx_briggsae | 1 | 2698 | ||||
3R5:wublastx_japonica | 1 | 2698 | ||||
3R5:wublastx_remanei | 1 | 2698 | ||||
3R5:wublastx_worm | 1 | 2698 | ||||
3R5:RepeatMasker | 1 | 2698 | ||||
3R5:SAGE | 1 | 2698 | ||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | cTel5 | 2640 | ||||
Overlap_left | K08E3 | |||||
Clone_right_end | K08E3 | 52 | ||||
DB_info | Database | EMBL | NDB_AC | AL032671 | ||
NDB_SV | AL032671.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Barlow K | ||||
From_laboratory | HX | |||||
Date_directory | 981002 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | 3R5 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 3fe52b078f8e2d9ae8d82449d41c5bb6 | ||||
Status | Finished | 02 Oct 1998 00:00:00 | ||||
Submitted | 29 Oct 1998 00:00:00 | |||||
Annotated | 01 Jan 1980 00:00:00 | |||||
Map | Sequence-I | Ends | Left | 6474 | ||
Right | 6508 | |||||
Interpolated_map_position | III | 22.047 | ||||
Assembly_tags | Clone right end | 49 | 52 | K08E3 | ||
Finished Left | 1 | 4 | 3R5 | |||
Finished Right | 2695 | 2698 | 3R5 | |||
annotation | 720 | 754 | Region covered only by a single subclone which has been sequenced with both primer and terminator chemistries. Subclone is taken from a library made from a pcr product, the overall assembly is consistent with the size of the product when run on a gel. | |||
Method | Genomic_canonical |