WormBase Tree Display for Sequence: Y46H3A
expand all nodes | collapse all nodes | view schema
| Y46H3A | DNA | Y46H3A | 22070 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00021599 | 6012 | 8134 | |
| WBGene00002016 | 3509 | 2886 | ||||
| WBGene00305749 | 18967 | 18492 | ||||
| WBGene00001632 | 19875 | 14403 | ||||
| WBGene00044344 | 20131 | 21648 | ||||
| WBGene00021601 | 13436 | 9897 | ||||
| WBGene00021600 | 9687 | 8109 | ||||
| WBGene00002018 | 3730 | 4427 | ||||
| CDS_child (182) | ||||||
| Transcript | Y46H3A.7b | 20609 | 21648 | |||
| Y46H3A.8 | 18967 | 18492 | ||||
| Y46H3A.1a.1 | 7685 | 8020 | ||||
| Y46H3A.1b.1 | 6012 | 8134 | ||||
| Y46H3A.2.1 | 3730 | 4427 | ||||
| Y46H3A.3a.1 | 3509 | 2886 | ||||
| Y46H3A.3b.1 | 3422 | 2993 | ||||
| Y46H3A.4a.1 | 9687 | 8109 | ||||
| Y46H3A.4b.1 | 8330 | 8202 | ||||
| Y46H3A.4c.1 | 9661 | 8215 | ||||
| Y46H3A.5a.1 | 13436 | 9897 | ||||
| Y46H3A.5b.1 | 11923 | 9975 | ||||
| Y46H3A.6a.1 | 19875 | 14403 | ||||
| Y46H3A.6b.1 | 18964 | 14408 | ||||
| Y46H3A.6c.1 | 17333 | 14729 | ||||
| Y46H3A.7a.1 | 20131 | 21647 | ||||
| PCR_product (32) | ||||||
| Allele (343) | ||||||
| Oligo_set | Aff_Y32G9B_366.A | 12172 | 11240 | |||
| Aff_Y32G9B_366.B | 10112 | 8202 | ||||
| Aff_Y32G9B_366.C | 6758 | 7456 | ||||
| Aff_Y32G9B_366.D | 7685 | 8020 | ||||
| Aff_Y46H3A.A | 16232 | 14729 | ||||
| Aff_Y46H3A.D | 3476 | 2993 | ||||
| Aff_Y46H3A.E | 3823 | 4312 | ||||
| Aff_Y46H3A.H | 20880 | 21537 | ||||
| Feature_object (224) | ||||||
| Feature_data | Y46H3A:Polysome | 1 | 22070 | |||
| Y46H3A:TranscriptionallyActiveRegion | 1 | 22070 | ||||
| Y46H3A:ChIPSeqTF | 1 | 22070 | ||||
| Y46H3A:TRF | 1 | 22070 | ||||
| Y46H3A:Dust | 1 | 22070 | ||||
| Y46H3A:inverted | 1 | 22070 | ||||
| Homol_data (17) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | Y32G9B | 21671 | ||||
| Overlap_left | F36H9 | |||||
| Clone_right_end | Y46H3 | 22070 | ||||
| F36H9 | 200 | |||||
| Y46H3A | 22070 | |||||
| Y46H3B | 22070 | |||||
| Y46H3C | 22070 | |||||
| Y46H3D | 22070 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081307 | ||
| NDB_ID | _AC006774 | |||||
| NDB_SV | FO081307.1 | |||||
| Secondary_accession | AC006774 | |||||
| DB_remark | The 5' clone is F36H9, 200 bp overlap; the 3' clone is Y32G9B, 400 bp overlap. Actual start of this clone is at base position 23330 of F16B4; actual end is at 22070 of Y46H3A. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Stoneking T | ||||
| Wohldmann P | ||||||
| Lennox S | ||||||
| From_laboratory | RW | |||||
| Date | 04 Sep 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | Y46H3A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 4648808338a22c10da6ba19a77b32d79 | ||||
| Status | Finished | |||||
| Submitted | 04 Sep 1998 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | -17.1754 | ||||
| Method | Genomic_canonical |
