WormBase Tree Display for Sequence: VC5
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| VC5 | DNA | VC5 | 36381 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (16) | ||||
| CDS_child (194) | ||||||
| Transcript | VC5.7 | 11578 | 11558 | |||
| VC5.8 | 24303 | 24495 | ||||
| VC5.9 | 24497 | 24182 | ||||
| VC5.10 | 23282 | 23149 | ||||
| VC5.11 | 25678 | 25628 | ||||
| VC5.12 | 27136 | 27281 | ||||
| VC5.13 | 23147 | 23281 | ||||
| VC5.14 | 23031 | 22883 | ||||
| VC5.15 | 25628 | 25678 | ||||
| VC5.16 | 22832 | 22688 | ||||
| VC5.17 | 22686 | 23029 | ||||
| VC5.18 | 9695 | 9155 | ||||
| VC5.2.1 | 10042 | 12940 | ||||
| VC5.3b.2 | 41 | 5601 | ||||
| VC5.3b.3 | 435 | 5608 | ||||
| VC5.3b.4 | 435 | 5583 | ||||
| VC5.3b.5 | 441 | 5625 | ||||
| VC5.3b.6 | 577 | 5608 | ||||
| VC5.3b.7 | 579 | 5586 | ||||
| VC5.3b.8 | 3413 | 5608 | ||||
| VC5.4.1 | 8748 | 5631 | ||||
| VC5.5.1 | 17856 | 15800 | ||||
| VC5.6.1 | 15696 | 13557 | ||||
| PCR_product (20) | ||||||
| Allele (290) | ||||||
| Oligo_set | Aff_VC5.1 | 4546 | 5540 | |||
| Feature_object (247) | ||||||
| Feature_data | VC5:Polysome | 1 | 36381 | |||
| VC5:TranscriptionallyActiveRegion | 1 | 36380 | ||||
| VC5:ChIPSeqTF | 1 | 36381 | ||||
| VC5:TRF | 1 | 36381 | ||||
| VC5:Dust | 1 | 36381 | ||||
| VC5:inverted | 1 | 36381 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | T01C4 | 27381 | ||||
| Overlap_left | F27B10 | |||||
| Clone_left_end | T01C4 | 36181 | ||||
| VC5 | 597 | |||||
| Clone_right_end | F27B10 | 27900 | ||||
| Y57E12 | 22315 | |||||
| Y57E12AR | 22315 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081233 | ||
| NDB_ID | _AF106581 | |||||
| NDB_SV | FO081233.2 | |||||
| Secondary_accession | AF106581 | |||||
| DB_remark | The 5' clone is F27B10, 600 bp overlap; the 3' clone is T01C4, 9000 bp overlap. Actual start of this clone is at base position 597 of VC5; actual end is at 2571 of T01C4. | |||||
| [121025] Sequence correction WBsf268397 : Insertion C1 bases from @ 33085 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Tin-Wollam A.M. | ||||
| Wohldmann P | ||||||
| From_laboratory | RW | |||||
| Date | 15 Oct 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | VC5 | ||||
| Reference | WBPaper00013935 | |||||
| WBPaper00022251 | ||||||
| WBPaper00022789 | ||||||
| Remark | annotated 981015-js | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 8e1daa0bc3088e25b7eea0c844e8891c | ||||
| Status | Finished | |||||
| Submitted | 15 Oct 1998 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | 0.579774 | ||||
| Method | Genomic_canonical |
