WormBase Tree Display for Sequence: C27A2
expand all nodes | collapse all nodes | view schema
| C27A2 | DNA | C27A2 | 29371 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (350) | ||||||
| Transcript | C27A2.2b | 2892 | 3448 | |||
| C27A2.9 | 9365 | 9385 | ||||
| C27A2.10 | 4706 | 4794 | ||||
| C27A2.11 | 16630 | 16928 | ||||
| C27A2.t1 | 4790 | 4717 | ||||
| C27A2.1.1 | 9395 | 14399 | ||||
| C27A2.12.1 | 5406 | 3481 | ||||
| C27A2.2a.1 | 2886 | 3484 | ||||
| C27A2.3.1 | 2449 | 1405 | ||||
| C27A2.4.1 | 8089 | 6111 | ||||
| C27A2.5.1 | 16895 | 15918 | ||||
| C27A2.6.1 | 28444 | 25503 | ||||
| C27A2.7.1 | 18635 | 17030 | ||||
| C27A2.8.1 | 15313 | 14310 | ||||
| PCR_product (24) | ||||||
| Allele (395) | ||||||
| Oligo_set | Aff_C27A2.1 | 13594 | 14240 | |||
| Aff_C27A2.2 | 2892 | 3448 | ||||
| Aff_C27A2.3 | 2240 | 1531 | ||||
| Aff_C27A2.4 | 4379 | 3498 | ||||
| Aff_C27A2.5 | 16878 | 16005 | ||||
| Aff_C27A2.6 | 26799 | 25956 | ||||
| Aff_C04G6.4 | 29739 | 28977 | ||||
| Feature_object (401) | ||||||
| Feature_data | C27A2:Polysome | 1 | 29371 | |||
| C27A2:TranscriptionallyActiveRegion | 1 | 29371 | ||||
| C27A2:ChIPSeqTF | 1 | 29371 | ||||
| C27A2:TRF | 1 | 29371 | ||||
| C27A2:Dust | 1 | 29371 | ||||
| C27A2:inverted | 1 | 29371 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | C04G6 | 28972 | ||||
| Overlap_left | F33G12 | |||||
| Clone_left_end | C27A2 | 197 | ||||
| Clone_right_end | F33G12 | 12585 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080349 | ||
| NDB_ID | _U58760 | |||||
| NDB_SV | FO080349.1 | |||||
| Secondary_accession | U58760 | |||||
| DB_remark | The 5' clone is F33G12, 1400 bp overlap; the 3' clone is C04G6, 400 bp overlap. Actual start of this clone is at base position 197 of C27A2; actual end is at 11271 of C04G6. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Nhan M | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 23 Aug 1995 00:00:00 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C27A2 | ||||
| Remark | [20100423 wnash] added 1 bp (c) at position 26551 (between GCGGAGGCCG and CCAAACGGAG) | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 3488909c1bcabad150fdf3178e5ea96e | ||||
| Status | Finished | |||||
| Submitted | 23 Aug 1995 00:00:00 | |||||
| Map | Sequence-II | |||||
| Interpolated_map_position | II | -2.55054 | ||||
| Method | Genomic_canonical |
