WormBase Tree Display for Sequence: SRAE_chrX_scaffold2
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| SRAE_chrX_scaffold2 | DNA | SRAE_ChrX_scaffold0000002 | 3745422 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (882) | ||||
| CDS_child (820) | ||||||
| Transcript (885) | ||||||
| Feature_object (564) | ||||||
| Feature_data (120) | ||||||
| Homol_data | BLAT_mRNA:SRAE_chrX_scaffold2 | 1 | 3745422 | |||
| BLAT_mRNA:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_EST:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_Trinity:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_IsoSeq:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_mRNA:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_ncRNA:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_OST:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_OST:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_tc1:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_tc1:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_tc1:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_RST:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2 | 1 | 3745422 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_1 | 1 | 150000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_2 | 150001 | 300000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_3 | 300001 | 450000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_4 | 450001 | 600000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_5 | 600001 | 750000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_6 | 750001 | 900000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_7 | 900001 | 1050000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_8 | 1050001 | 1200000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_9 | 1200001 | 1350000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_10 | 1350001 | 1500000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_11 | 1500001 | 1650000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_12 | 1650001 | 1800000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_13 | 1800001 | 1950000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_14 | 1950001 | 2100000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_15 | 2100001 | 2250000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_16 | 2250001 | 2400000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_17 | 2400001 | 2550000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_18 | 2550001 | 2700000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_19 | 2700001 | 2850000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_20 | 2850001 | 3000000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_21 | 3000001 | 3150000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_22 | 3150001 | 3300000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_23 | 3300001 | 3450000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_24 | 3450001 | 3600000 | ||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_25 | 3600001 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_brenneri | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_briggsae | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_brugia | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_fly | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_human | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_japonica | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_ovolvulus | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_pristionchus | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_remanei | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_slimSwissProt | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_sratti | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_tmuris | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_worm | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:wublastx_yeast | 1 | 3745422 | ||||
| SRAE_chrX_scaffold2:RepeatMasker | 1 | 3745422 | ||||
| DB_info | Database | EMBL | NDB_AC | LN609396 | ||
| NDB_SV | LN609396.1 | |||||
| Keyword | HTG | |||||
| Origin | From_laboratory | MBM | ||||
| Species | Strongyloides ratti | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 78406a83bbb854f67a896db1216ee3e0 | ||||
| Method | Genomic_canonical |
