WormBase Tree Display for Sequence: VC5
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| VC5 | DNA | VC5 | 36381 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (16) | ||||
| CDS_child (194) | ||||||
| Transcript (23) | ||||||
| PCR_product (20) | ||||||
| Allele (290) | ||||||
| Oligo_set | Aff_VC5.1 | 4546 | 5540 | |||
| Feature_object | WBsf1000424 | 8995 | 9094 | |||
| WBsf1000425 | 17904 | 18054 | ||||
| WBsf1000426 | 21504 | 21654 | ||||
| WBsf1000427 | 22804 | 22954 | ||||
| WBsf1000428 | 25664 | 25814 | ||||
| WBsf1019894 | 8995 | 9074 | ||||
| WBsf1019895 | 17924 | 18074 | ||||
| WBsf1019896 | 21564 | 21714 | ||||
| WBsf1019897 | 25664 | 25814 | ||||
| WBsf019484 | 8749 | 8748 | ||||
| WBsf023338 | 10042 | 10043 | ||||
| WBsf026311 | 15801 | 15800 | ||||
| WBsf026564 | 15819 | 15814 | ||||
| WBsf026834 | 5644 | 5645 | ||||
| WBsf026906 | 5637 | 5642 | ||||
| WBsf026907 | 5567 | 5572 | ||||
| WBsf099099 | 14534 | 14534 | ||||
| WBsf099661 | 3998 | 3998 | ||||
| WBsf100094 | 14658 | 14658 | ||||
| WBsf100481 | 12943 | 12943 | ||||
| WBsf100482 | 15801 | 15801 | ||||
| WBsf101787 | 5631 | 5631 | ||||
| WBsf101788 | 12881 | 12881 | ||||
| WBsf102608 | 5675 | 5675 | ||||
| WBsf103383 | 14568 | 14568 | ||||
| WBsf103384 | 16097 | 16097 | ||||
| WBsf129844 | 17817 | 17816 | ||||
| WBsf130338 | 15659 | 15658 | ||||
| WBsf131207 | 15659 | 15658 | ||||
| WBsf189438 | 17423 | 17422 | ||||
| WBsf189502 | 17133 | 17132 | ||||
| WBsf189938 | 14534 | 14534 | ||||
| WBsf190288 | 5631 | 5631 | ||||
| WBsf190663 | 15801 | 15801 | ||||
| WBsf191237 | 5862 | 5862 | ||||
| WBsf191487 | 14658 | 14658 | ||||
| WBsf192982 | 15076 | 15076 | ||||
| WBsf192983 | 17051 | 17051 | ||||
| WBsf194126 | 7372 | 7372 | ||||
| WBsf194127 | 16592 | 16592 | ||||
| WBsf194694 | 5861 | 5861 | ||||
| WBsf195082 | 5675 | 5675 | ||||
| WBsf195390 | 5673 | 5673 | ||||
| WBsf195391 | 16091 | 16091 | ||||
| WBsf196189 | 16776 | 16776 | ||||
| WBsf196687 | 14568 | 14568 | ||||
| WBsf196688 | 16097 | 16097 | ||||
| WBsf197442 | 16890 | 16890 | ||||
| WBsf198115 | 17817 | 17816 | ||||
| WBsf203428 | 5631 | 5630 | ||||
| WBsf231936 | 5541 | 5582 | ||||
| WBsf231937 | 5541 | 5605 | ||||
| WBsf231938 | 5541 | 5632 | ||||
| WBsf231939 | 5541 | 5663 | ||||
| WBsf231940 | 12852 | 12910 | ||||
| WBsf231941 | 12852 | 12938 | ||||
| WBsf233902 | 5843 | 5634 | ||||
| WBsf233903 | 13700 | 13559 | ||||
| WBsf233904 | 13700 | 13577 | ||||
| WBsf233905 | 13700 | 13633 | ||||
| WBsf252989 | 5633 | 5634 | ||||
| WBsf252990 | 5630 | 5629 | ||||
| WBsf252991 | 12976 | 12977 | ||||
| WBsf257140 | 13556 | 13555 | ||||
| WBsf257141 | 13640 | 13639 | ||||
| WBsf276471 | 5606 | 5607 | ||||
| WBsf276549 | 13576 | 13575 | ||||
| WBsf276654 | 4927 | 4928 | ||||
| WBsf276708 | 12940 | 12941 | ||||
| WBsf276793 | 5583 | 5584 | ||||
| WBsf277018 | 6769 | 6768 | ||||
| WBsf277041 | 5627 | 5628 | ||||
| WBsf277248 | 1674 | 1675 | ||||
| WBsf277856 | 8420 | 8419 | ||||
| WBsf628514 | 5667 | 5668 | ||||
| WBsf629057 | 12911 | 12912 | ||||
| WBsf629842 | 5618 | 5619 | ||||
| WBsf630422 | 5645 | 5646 | ||||
| WBsf631434 | 5594 | 5595 | ||||
| WBsf631764 | 13541 | 13540 | ||||
| WBsf635039 | 9154 | 9153 | ||||
| WBsf635040 | 19521 | 19520 | ||||
| WBsf635484 | 5487 | 5488 | ||||
| WBsf635485 | 19520 | 19519 | ||||
| WBsf635892 | 5483 | 5484 | ||||
| WBsf636135 | 5482 | 5483 | ||||
| WBsf970591 | 5447 | 5448 | ||||
| WBsf970592 | 6637 | 6636 | ||||
| WBsf970593 | 8749 | 8748 | ||||
| WBsf970594 | 9624 | 9623 | ||||
| WBsf970595 | 15078 | 15077 | ||||
| WBsf970596 | 21471 | 21472 | ||||
| WBsf970597 | 22147 | 22148 | ||||
| WBsf970598 | 27322 | 27323 | ||||
| WBsf037477 | 6556 | 8654 | ||||
| WBsf499637 | 5649 | 6037 | ||||
| WBsf499989 | 5384 | 5392 | ||||
| WBsf500269 | 5709 | 6146 | ||||
| WBsf500565 | 20705 | 20720 | ||||
| WBsf501205 | 15360 | 16073 | ||||
| WBsf501215 | 4070 | 6002 | ||||
| WBsf501525 | 16406 | 17102 | ||||
| WBsf501951 | 15323 | 16138 | ||||
| WBsf502113 | 17610 | 18325 | ||||
| WBsf502297 | 9634 | 10226 | ||||
| WBsf502510 | 13311 | 13685 | ||||
| WBsf503379 | 8853 | 9235 | ||||
| WBsf503588 | 15366 | 15756 | ||||
| WBsf503744 | 8731 | 9285 | ||||
| WBsf503792 | 5236 | 6619 | ||||
| WBsf503995 | 13184 | 13682 | ||||
| WBsf504077 | 17810 | 18436 | ||||
| WBsf504349 | 1494 | 2383 | ||||
| WBsf504458 | 2759 | 3475 | ||||
| WBsf504546 | 19392 | 20098 | ||||
| WBsf504938 | 15470 | 15937 | ||||
| WBsf505180 | 16893 | 17015 | ||||
| WBsf505211 | 4233 | 4700 | ||||
| WBsf505401 | 17272 | 17330 | ||||
| WBsf508676 | 20449 | 21380 | ||||
| WBsf508775 | 19191 | 20229 | ||||
| WBsf509196 | 9619 | 10155 | ||||
| WBsf509203 | 15390 | 15908 | ||||
| WBsf509243 | 17510 | 18370 | ||||
| WBsf509247 | 8883 | 9193 | ||||
| WBsf509825 | 13043 | 13679 | ||||
| WBsf510806 | 17947 | 18198 | ||||
| WBsf511165 | 13325 | 13722 | ||||
| WBsf511328 | 17603 | 18414 | ||||
| WBsf511637 | 9753 | 10125 | ||||
| WBsf512481 | 11644 | 12023 | ||||
| WBsf513054 | 11644 | 12023 | ||||
| WBsf513236 | 17944 | 18248 | ||||
| WBsf514503 | 13392 | 13629 | ||||
| WBsf514530 | 8876 | 9067 | ||||
| WBsf514833 | 17957 | 18361 | ||||
| WBsf515147 | 17725 | 18517 | ||||
| WBsf515435 | 19372 | 20245 | ||||
| WBsf516081 | 13349 | 13665 | ||||
| WBsf516323 | 20487 | 21143 | ||||
| WBsf516614 | 8847 | 9143 | ||||
| WBsf517288 | 8928 | 9154 | ||||
| WBsf518072 | 8865 | 9166 | ||||
| WBsf518195 | 17867 | 18232 | ||||
| WBsf518818 | 17812 | 18490 | ||||
| WBsf519308 | 19332 | 20208 | ||||
| WBsf519374 | 20474 | 21187 | ||||
| WBsf519792 | 13334 | 14873 | ||||
| WBsf520998 | 8806 | 9176 | ||||
| WBsf521812 | 22809 | 23350 | ||||
| WBsf521828 | 8900 | 9164 | ||||
| WBsf522178 | 4473 | 6460 | ||||
| WBsf522778 | 17826 | 18257 | ||||
| WBsf522897 | 13356 | 13672 | ||||
| WBsf523224 | 8906 | 9164 | ||||
| WBsf523584 | 19575 | 19977 | ||||
| WBsf523592 | 16955 | 17154 | ||||
| WBsf524203 | 17906 | 18185 | ||||
| WBsf525239 | 4345 | 5356 | ||||
| WBsf525737 | 4916 | 6228 | ||||
| WBsf525807 | 15423 | 15902 | ||||
| WBsf526001 | 5082 | 6091 | ||||
| WBsf526115 | 15387 | 17471 | ||||
| WBsf526600 | 14970 | 15101 | ||||
| WBsf527107 | 15445 | 16003 | ||||
| WBsf527604 | 8925 | 9147 | ||||
| WBsf527763 | 17713 | 18231 | ||||
| WBsf528838 | 2685 | 2716 | ||||
| WBsf529219 | 9748 | 9880 | ||||
| WBsf529314 | 17969 | 18080 | ||||
| WBsf529546 | 13364 | 13453 | ||||
| WBsf529784 | 19893 | 19909 | ||||
| WBsf529959 | 13233 | 13764 | ||||
| WBsf530271 | 9466 | 10200 | ||||
| WBsf531007 | 15423 | 15851 | ||||
| WBsf531697 | 17658 | 18352 | ||||
| WBsf531841 | 15326 | 15785 | ||||
| WBsf531896 | 13354 | 13629 | ||||
| WBsf532205 | 11635 | 11861 | ||||
| WBsf532312 | 8918 | 9133 | ||||
| WBsf532533 | 19752 | 19933 | ||||
| WBsf532603 | 9748 | 9970 | ||||
| WBsf533138 | 14938 | 14997 | ||||
| WBsf533241 | 26910 | 26929 | ||||
| WBsf533278 | 405 | 512 | ||||
| WBsf534040 | 19164 | 19181 | ||||
| WBsf534882 | 8566 | 9276 | ||||
| WBsf535436 | 9648 | 10223 | ||||
| WBsf535440 | 17884 | 18344 | ||||
| WBsf535549 | 13340 | 13684 | ||||
| WBsf535748 | 8571 | 10135 | ||||
| WBsf536301 | 13334 | 13661 | ||||
| WBsf536854 | 8867 | 9179 | ||||
| WBsf537373 | 8955 | 9177 | ||||
| WBsf537779 | 17657 | 18605 | ||||
| WBsf538128 | 19413 | 20791 | ||||
| WBsf538897 | 17873 | 18198 | ||||
| WBsf538951 | 8909 | 9161 | ||||
| WBsf539056 | 15367 | 15764 | ||||
| WBsf539226 | 19494 | 19889 | ||||
| WBsf539341 | 17792 | 18355 | ||||
| WBsf539488 | 19430 | 20161 | ||||
| WBsf541545 | 8749 | 9210 | ||||
| WBsf542347 | 14519 | 14555 | ||||
| WBsf542877 | 17836 | 18552 | ||||
| WBsf543255 | 8642 | 9210 | ||||
| WBsf545317 | 5681 | 5692 | ||||
| WBsf545664 | 8859 | 9218 | ||||
| WBsf546493 | 9671 | 9901 | ||||
| WBsf546946 | 17936 | 18130 | ||||
| WBsf547459 | 8785 | 9211 | ||||
| WBsf547664 | 13347 | 13679 | ||||
| WBsf547850 | 17650 | 18457 | ||||
| WBsf548055 | 5882 | 6065 | ||||
| WBsf549146 | 17365 | 17418 | ||||
| WBsf549593 | 19779 | 19945 | ||||
| WBsf550360 | 23098 | 23187 | ||||
| WBsf550474 | 8964 | 9003 | ||||
| WBsf551277 | 5589 | 6064 | ||||
| WBsf551312 | 12982 | 14845 | ||||
| WBsf551361 | 15364 | 18613 | ||||
| WBsf043618 | 10927 | 11700 | ||||
| WBsf646918 | 9933 | 9933 | ||||
| WBsf646919 | 9992 | 10020 | ||||
| WBsf646920 | 10079 | 10079 | ||||
| WBsf652755 | 8965 | 8945 | ||||
| WBsf652756 | 17872 | 17829 | ||||
| WBsf652757 | 18088 | 17930 | ||||
| WBsf661404 | 3727 | 3730 | ||||
| WBsf661405 | 11834 | 11834 | ||||
| WBsf661406 | 11929 | 11940 | ||||
| WBsf661407 | 22829 | 22863 | ||||
| WBsf661408 | 24484 | 24527 | ||||
| WBsf668613 | 22728 | 22710 | ||||
| WBsf686012 | 5738 | 5779 | ||||
| WBsf686013 | 18046 | 18161 | ||||
| WBsf686014 | 18451 | 18483 | ||||
| WBsf686015 | 18543 | 18543 | ||||
| WBsf686016 | 25875 | 25875 | ||||
| WBsf707955 | 9953 | 9929 | ||||
| WBsf707956 | 18377 | 18358 | ||||
| WBsf707957 | 19599 | 19586 | ||||
| WBsf707958 | 21062 | 21062 | ||||
| WBsf716324 | 11699 | 11655 | ||||
| WBsf718336 | 19430 | 20161 | ||||
| WBsf263180 | 9972 | 10023 | ||||
| WBsf266129 | 22715 | 22770 | ||||
| Feature_data | VC5:Polysome | 1 | 36381 | |||
| VC5:TranscriptionallyActiveRegion | 1 | 36380 | ||||
| VC5:ChIPSeqTF | 1 | 36381 | ||||
| VC5:TRF | 1 | 36381 | ||||
| VC5:Dust | 1 | 36381 | ||||
| VC5:inverted | 1 | 36381 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | T01C4 | 27381 | ||||
| Overlap_left | F27B10 | |||||
| Clone_left_end | T01C4 | 36181 | ||||
| VC5 | 597 | |||||
| Clone_right_end | F27B10 | 27900 | ||||
| Y57E12 | 22315 | |||||
| Y57E12AR | 22315 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081233 | ||
| NDB_ID | _AF106581 | |||||
| NDB_SV | FO081233.2 | |||||
| Secondary_accession | AF106581 | |||||
| DB_remark | The 5' clone is F27B10, 600 bp overlap; the 3' clone is T01C4, 9000 bp overlap. Actual start of this clone is at base position 597 of VC5; actual end is at 2571 of T01C4. | |||||
| [121025] Sequence correction WBsf268397 : Insertion C1 bases from @ 33085 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Tin-Wollam A.M. | ||||
| Wohldmann P | ||||||
| From_laboratory | RW | |||||
| Date | 15 Oct 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | VC5 | ||||
| Reference | WBPaper00013935 | |||||
| WBPaper00022251 | ||||||
| WBPaper00022789 | ||||||
| Remark | annotated 981015-js | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 8e1daa0bc3088e25b7eea0c844e8891c | ||||
| Status | Finished | |||||
| Submitted | 15 Oct 1998 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | 0.579774 | ||||
| Method | Genomic_canonical |
