WormBase Tree Display for Sequence: C07E3
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| C07E3 | DNA | C07E3 | 43815 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (15) | ||||
| CDS_child (285) | ||||||
| Transcript (19) | ||||||
| Genomic_non_canonical | WRM067cH01 | 4207 | 26365 | |||
| WRM0617bG10 | 129 | 36077 | ||||
| WRM0640dD10 | 12172 | 42247 | ||||
| PCR_product (41) | ||||||
| Allele (673) | ||||||
| Oligo_set | Aff_C07E3.1 | 4929 | 4234 | |||
| Aff_C07E3.10 | 3493 | 3940 | ||||
| Aff_C07E3.3 | 11540 | 10849 | ||||
| Aff_C07E3.5 | 22100 | 20797 | ||||
| Aff_C07E3.6 | 26625 | 25352 | ||||
| Aff_C07E3.7 | 25239 | 25003 | ||||
| Aff_C07E3.8 | 9834 | 10582 | ||||
| Aff_C07E3.9 | 7853 | 8574 | ||||
| Aff_T09F3.1 | 43683 | 44855 | ||||
| Feature_object | WBsf989319 | 3251 | 3401 | |||
| WBsf989320 | 6951 | 7040 | ||||
| WBsf989321 | 9751 | 9847 | ||||
| WBsf989322 | 16591 | 16741 | ||||
| WBsf989323 | 17431 | 17581 | ||||
| WBsf989324 | 17971 | 18022 | ||||
| WBsf989325 | 18391 | 18429 | ||||
| WBsf989326 | 19501 | 19547 | ||||
| WBsf989327 | 27031 | 27181 | ||||
| WBsf989328 | 28131 | 28281 | ||||
| WBsf989329 | 30671 | 30821 | ||||
| WBsf989330 | 31911 | 32061 | ||||
| WBsf989331 | 39011 | 39161 | ||||
| WBsf989332 | 39491 | 39641 | ||||
| WBsf989333 | 40091 | 40241 | ||||
| WBsf989334 | 40791 | 40941 | ||||
| WBsf1013004 | 3251 | 3401 | ||||
| WBsf1013005 | 16591 | 16741 | ||||
| WBsf1013006 | 17411 | 17561 | ||||
| WBsf1013007 | 17951 | 18022 | ||||
| WBsf1013008 | 18378 | 18429 | ||||
| WBsf1013009 | 27011 | 27161 | ||||
| WBsf1013010 | 28151 | 28301 | ||||
| WBsf1013011 | 31951 | 32101 | ||||
| WBsf1013012 | 39511 | 39661 | ||||
| WBsf1013013 | 40091 | 40241 | ||||
| WBsf1013014 | 40791 | 40941 | ||||
| WBsf001764 | 14610 | 14609 | ||||
| WBsf002638 | 26689 | 26688 | ||||
| WBsf006697 | 42423 | 42424 | ||||
| WBsf015791 | 2204 | 2203 | ||||
| WBsf019669 | 3487 | 3488 | ||||
| WBsf022461 | 7852 | 7853 | ||||
| WBsf023100 | 7097 | 7096 | ||||
| WBsf023127 | 22863 | 22862 | ||||
| WBsf024621 | 4099 | 4100 | ||||
| WBsf024847 | 4078 | 4083 | ||||
| WBsf027541 | 22801 | 22800 | ||||
| WBsf039165 | 17962 | 20005 | ||||
| WBsf061291 | 4094 | 4094 | ||||
| WBsf061292 | 4173 | 4173 | ||||
| WBsf061293 | 8706 | 8706 | ||||
| WBsf061294 | 10737 | 10737 | ||||
| WBsf062114 | 4231 | 4231 | ||||
| WBsf062115 | 8371 | 8371 | ||||
| WBsf062116 | 10794 | 10794 | ||||
| WBsf062523 | 8087 | 8087 | ||||
| WBsf062718 | 21071 | 21071 | ||||
| WBsf062974 | 10788 | 10788 | ||||
| WBsf063518 | 10722 | 10722 | ||||
| WBsf064183 | 3977 | 3977 | ||||
| WBsf064184 | 4209 | 4209 | ||||
| WBsf064185 | 10831 | 10831 | ||||
| WBsf064186 | 24843 | 24843 | ||||
| WBsf065046 | 8718 | 8718 | ||||
| WBsf065809 | 4100 | 4100 | ||||
| WBsf065810 | 4164 | 4164 | ||||
| WBsf065811 | 10714 | 10714 | ||||
| WBsf065812 | 25018 | 25018 | ||||
| WBsf066537 | 3840 | 3840 | ||||
| WBsf066538 | 5910 | 5910 | ||||
| WBsf066539 | 10779 | 10779 | ||||
| WBsf066540 | 25502 | 25502 | ||||
| WBsf067792 | 4161 | 4161 | ||||
| WBsf067793 | 8712 | 8712 | ||||
| WBsf067794 | 10893 | 10893 | ||||
| WBsf067795 | 24976 | 24976 | ||||
| WBsf124500 | 2204 | 2203 | ||||
| WBsf125751 | 14610 | 14609 | ||||
| WBsf125752 | 26689 | 26688 | ||||
| WBsf147697 | 6877 | 6876 | ||||
| WBsf147829 | 4231 | 4231 | ||||
| WBsf147830 | 10794 | 10794 | ||||
| WBsf148475 | 10722 | 10722 | ||||
| WBsf148836 | 4173 | 4173 | ||||
| WBsf148837 | 10737 | 10737 | ||||
| WBsf148838 | 11675 | 11675 | ||||
| WBsf149408 | 10788 | 10788 | ||||
| WBsf149599 | 4161 | 4161 | ||||
| WBsf149600 | 10893 | 10893 | ||||
| WBsf149601 | 13825 | 13825 | ||||
| WBsf149602 | 24976 | 24976 | ||||
| WBsf150286 | 4168 | 4168 | ||||
| WBsf150287 | 8617 | 8617 | ||||
| WBsf150288 | 10787 | 10787 | ||||
| WBsf150289 | 13837 | 13837 | ||||
| WBsf150290 | 24838 | 24838 | ||||
| WBsf150291 | 43694 | 43694 | ||||
| WBsf151382 | 4061 | 4061 | ||||
| WBsf151383 | 6683 | 6683 | ||||
| WBsf151384 | 8645 | 8645 | ||||
| WBsf151385 | 10793 | 10793 | ||||
| WBsf151386 | 13678 | 13678 | ||||
| WBsf152904 | 4164 | 4164 | ||||
| WBsf152905 | 10714 | 10714 | ||||
| WBsf152906 | 25018 | 25018 | ||||
| WBsf153232 | 25979 | 25979 | ||||
| WBsf153523 | 21071 | 21071 | ||||
| WBsf153588 | 3768 | 3768 | ||||
| WBsf153589 | 8591 | 8591 | ||||
| WBsf153590 | 10769 | 10769 | ||||
| WBsf153591 | 24864 | 24864 | ||||
| WBsf154442 | 5910 | 5910 | ||||
| WBsf154443 | 10779 | 10779 | ||||
| WBsf154444 | 25502 | 25502 | ||||
| WBsf154853 | 4191 | 4191 | ||||
| WBsf154854 | 8550 | 8550 | ||||
| WBsf154855 | 10891 | 10891 | ||||
| WBsf154856 | 24861 | 24861 | ||||
| WBsf155843 | 4209 | 4209 | ||||
| WBsf155844 | 10831 | 10831 | ||||
| WBsf155845 | 24843 | 24843 | ||||
| WBsf156275 | 3487 | 3488 | ||||
| WBsf156293 | 42423 | 42424 | ||||
| WBsf156342 | 7097 | 7096 | ||||
| WBsf221998 | 3941 | 4012 | ||||
| WBsf221999 | 3941 | 4086 | ||||
| WBsf222000 | 8575 | 8703 | ||||
| WBsf222001 | 8575 | 8850 | ||||
| WBsf223783 | 4233 | 4177 | ||||
| WBsf223784 | 4233 | 4194 | ||||
| WBsf223785 | 10848 | 10725 | ||||
| WBsf223786 | 10848 | 10822 | ||||
| WBsf223787 | 20796 | 20666 | ||||
| WBsf223788 | 20796 | 20686 | ||||
| WBsf223789 | 25002 | 24836 | ||||
| WBsf243269 | 4096 | 4097 | ||||
| WBsf243270 | 4053 | 4052 | ||||
| WBsf243271 | 6673 | 6672 | ||||
| WBsf243272 | 10723 | 10722 | ||||
| WBsf243978 | 20085 | 20086 | ||||
| WBsf243979 | 20663 | 20662 | ||||
| WBsf243980 | 24816 | 24815 | ||||
| WBsf243981 | 24948 | 24947 | ||||
| WBsf243982 | 10793 | 10794 | ||||
| WBsf243983 | 8851 | 8852 | ||||
| WBsf243984 | 8733 | 8734 | ||||
| WBsf270989 | 8704 | 8705 | ||||
| WBsf271913 | 20089 | 20090 | ||||
| WBsf272346 | 20088 | 20089 | ||||
| WBsf608866 | 8655 | 8656 | ||||
| WBsf609052 | 8621 | 8622 | ||||
| WBsf609284 | 8716 | 8717 | ||||
| WBsf610792 | 8813 | 8814 | ||||
| WBsf610923 | 8685 | 8686 | ||||
| WBsf611301 | 4176 | 4175 | ||||
| WBsf611473 | 20693 | 20692 | ||||
| WBsf611637 | 20130 | 20129 | ||||
| WBsf611766 | 24835 | 24834 | ||||
| WBsf612212 | 24960 | 24959 | ||||
| WBsf612579 | 6815 | 6814 | ||||
| WBsf612722 | 20153 | 20152 | ||||
| WBsf614454 | 17368 | 17367 | ||||
| WBsf614826 | 8594 | 8595 | ||||
| WBsf898126 | 1344 | 1345 | ||||
| WBsf950752 | 645 | 644 | ||||
| WBsf950753 | 5805 | 5806 | ||||
| WBsf950754 | 7852 | 7853 | ||||
| WBsf950755 | 7880 | 7881 | ||||
| WBsf950756 | 10055 | 10056 | ||||
| WBsf950757 | 13361 | 13360 | ||||
| WBsf950758 | 18486 | 18485 | ||||
| WBsf950759 | 18522 | 18521 | ||||
| WBsf950760 | 21117 | 21116 | ||||
| WBsf950761 | 30881 | 30880 | ||||
| WBsf950762 | 42409 | 42410 | ||||
| WBsf034911 | 4321 | 7319 | ||||
| WBsf343098 | 4228 | 4535 | ||||
| WBsf344162 | 34988 | 35390 | ||||
| WBsf344339 | 39166 | 39885 | ||||
| WBsf344398 | 41685 | 42314 | ||||
| WBsf344450 | 40549 | 41111 | ||||
| WBsf344509 | 30602 | 30978 | ||||
| WBsf344687 | 27897 | 28343 | ||||
| WBsf344723 | 26926 | 27299 | ||||
| WBsf344756 | 15307 | 15632 | ||||
| WBsf345043 | 2380 | 2664 | ||||
| WBsf345534 | 7605 | 7963 | ||||
| WBsf345673 | 7536 | 8001 | ||||
| WBsf345842 | 39232 | 39778 | ||||
| WBsf346178 | 41652 | 42188 | ||||
| WBsf346638 | 30223 | 30416 | ||||
| WBsf347039 | 35088 | 35285 | ||||
| WBsf347094 | 30704 | 30828 | ||||
| WBsf347200 | 7214 | 7221 | ||||
| WBsf347223 | 16654 | 16754 | ||||
| WBsf347277 | 40761 | 40937 | ||||
| WBsf347280 | 17344 | 17360 | ||||
| WBsf347764 | 39363 | 39766 | ||||
| WBsf347788 | 41858 | 42206 | ||||
| WBsf347957 | 36784 | 36940 | ||||
| WBsf347988 | 27057 | 27244 | ||||
| WBsf348090 | 28049 | 28270 | ||||
| WBsf348196 | 40831 | 40971 | ||||
| WBsf348219 | 7657 | 7883 | ||||
| WBsf348611 | 40258 | 40399 | ||||
| WBsf348888 | 41812 | 42156 | ||||
| WBsf349127 | 30761 | 31133 | ||||
| WBsf349205 | 36813 | 36932 | ||||
| WBsf350325 | 7596 | 7736 | ||||
| WBsf350444 | 8689 | 8712 | ||||
| WBsf350720 | 41706 | 42337 | ||||
| WBsf350746 | 39246 | 39849 | ||||
| WBsf350858 | 40599 | 41141 | ||||
| WBsf351722 | 42806 | 43083 | ||||
| WBsf351922 | 16566 | 16884 | ||||
| WBsf351960 | 30134 | 30453 | ||||
| WBsf352378 | 27922 | 28209 | ||||
| WBsf352461 | 3148 | 3624 | ||||
| WBsf352772 | 14769 | 15013 | ||||
| WBsf352830 | 7627 | 7862 | ||||
| WBsf352877 | 29697 | 29853 | ||||
| WBsf352991 | 35011 | 35265 | ||||
| WBsf353121 | 7124 | 7288 | ||||
| WBsf353268 | 2365 | 2560 | ||||
| WBsf353988 | 39323 | 39758 | ||||
| WBsf354254 | 40744 | 41115 | ||||
| WBsf354330 | 41815 | 42183 | ||||
| WBsf354642 | 12026 | 12056 | ||||
| WBsf354653 | 42831 | 42974 | ||||
| WBsf355993 | 40654 | 40991 | ||||
| WBsf356034 | 7590 | 7917 | ||||
| WBsf356347 | 39288 | 39734 | ||||
| WBsf356685 | 41705 | 42179 | ||||
| WBsf356871 | 39288 | 39734 | ||||
| WBsf357310 | 41705 | 42179 | ||||
| WBsf358414 | 7616 | 7913 | ||||
| WBsf358460 | 39286 | 39749 | ||||
| WBsf358495 | 41626 | 42165 | ||||
| WBsf358781 | 42447 | 42496 | ||||
| WBsf359049 | 27988 | 28209 | ||||
| WBsf359090 | 2140 | 2160 | ||||
| WBsf359198 | 30856 | 31190 | ||||
| WBsf359585 | 39251 | 39802 | ||||
| WBsf360048 | 30139 | 30467 | ||||
| WBsf360336 | 41779 | 42179 | ||||
| WBsf360635 | 30496 | 30879 | ||||
| WBsf361483 | 39357 | 39881 | ||||
| WBsf363074 | 27206 | 27229 | ||||
| WBsf363120 | 14789 | 14917 | ||||
| WBsf363194 | 28741 | 28832 | ||||
| WBsf363237 | 3822 | 3946 | ||||
| WBsf363787 | 7672 | 7943 | ||||
| WBsf364053 | 7579 | 7914 | ||||
| WBsf364186 | 39358 | 39701 | ||||
| WBsf364761 | 27949 | 28264 | ||||
| WBsf365268 | 24419 | 25260 | ||||
| WBsf365300 | 10337 | 11200 | ||||
| WBsf365458 | 3320 | 4409 | ||||
| WBsf366078 | 39297 | 39801 | ||||
| WBsf366148 | 41823 | 42223 | ||||
| WBsf366452 | 40666 | 41042 | ||||
| WBsf366503 | 7652 | 7929 | ||||
| WBsf367003 | 30599 | 31370 | ||||
| WBsf367274 | 41767 | 42224 | ||||
| WBsf367299 | 7650 | 7945 | ||||
| WBsf367361 | 27950 | 28363 | ||||
| WBsf367364 | 26890 | 27173 | ||||
| WBsf367709 | 24247 | 24839 | ||||
| WBsf367769 | 3229 | 3960 | ||||
| WBsf368865 | 2439 | 2552 | ||||
| WBsf369647 | 3757 | 3877 | ||||
| WBsf371138 | 24699 | 24791 | ||||
| WBsf371291 | 41738 | 42445 | ||||
| WBsf371436 | 7696 | 7882 | ||||
| WBsf371551 | 3807 | 3959 | ||||
| WBsf371765 | 39486 | 39802 | ||||
| WBsf371939 | 24348 | 24860 | ||||
| WBsf374106 | 39249 | 39824 | ||||
| WBsf374435 | 41736 | 42363 | ||||
| WBsf374697 | 40657 | 41013 | ||||
| WBsf375207 | 30690 | 30974 | ||||
| WBsf375597 | 7115 | 8076 | ||||
| WBsf376137 | 39382 | 39731 | ||||
| WBsf376215 | 36764 | 37023 | ||||
| WBsf376367 | 41775 | 42114 | ||||
| WBsf376434 | 7122 | 8102 | ||||
| WBsf377848 | 39331 | 39844 | ||||
| WBsf378280 | 41721 | 42241 | ||||
| WBsf378498 | 14703 | 15134 | ||||
| WBsf378535 | 39251 | 40172 | ||||
| WBsf378934 | 41561 | 42326 | ||||
| WBsf379121 | 16573 | 16921 | ||||
| WBsf379277 | 39284 | 39864 | ||||
| WBsf379390 | 41704 | 42269 | ||||
| WBsf379591 | 27960 | 28309 | ||||
| WBsf379970 | 7659 | 7897 | ||||
| WBsf380228 | 39261 | 39851 | ||||
| WBsf380272 | 41718 | 42214 | ||||
| WBsf381152 | 24160 | 24684 | ||||
| WBsf381225 | 3169 | 3495 | ||||
| WBsf381918 | 4274 | 4608 | ||||
| WBsf382443 | 7529 | 7966 | ||||
| WBsf383525 | 14701 | 15111 | ||||
| WBsf383620 | 39149 | 40113 | ||||
| WBsf384149 | 7219 | 7976 | ||||
| WBsf384799 | 27285 | 27428 | ||||
| WBsf385077 | 40886 | 40989 | ||||
| WBsf385468 | 7658 | 7906 | ||||
| WBsf385566 | 15857 | 15927 | ||||
| WBsf385698 | 41410 | 41499 | ||||
| WBsf386021 | 30690 | 30910 | ||||
| WBsf386071 | 27997 | 28176 | ||||
| WBsf386266 | 39266 | 39795 | ||||
| WBsf386816 | 39497 | 39940 | ||||
| WBsf387497 | 39453 | 39715 | ||||
| WBsf388356 | 7173 | 7958 | ||||
| WBsf389048 | 39362 | 39842 | ||||
| WBsf389159 | 30213 | 30412 | ||||
| WBsf389590 | 35132 | 35258 | ||||
| WBsf389711 | 41894 | 42192 | ||||
| WBsf390577 | 27982 | 28353 | ||||
| WBsf390818 | 30731 | 30907 | ||||
| WBsf390938 | 26987 | 27170 | ||||
| WBsf981260 | 38922 | 40060 | ||||
| WBsf046268 | 7090 | 7863 | ||||
| WBsf978330 | 40451 | 42446 | ||||
| WBsf978717 | 24217 | 22714 | ||||
| WBsf978811 | 28672 | 26669 | ||||
| WBsf979003 | 40451 | 42446 | ||||
| WBsf644604 | 3361 | 3385 | ||||
| WBsf644605 | 39556 | 39562 | ||||
| WBsf644606 | 39642 | 39701 | ||||
| WBsf644607 | 39748 | 39774 | ||||
| WBsf650497 | 7139 | 7126 | ||||
| WBsf650498 | 26859 | 26843 | ||||
| WBsf654913 | 2518 | 2640 | ||||
| WBsf658139 | 9409 | 9409 | ||||
| WBsf666037 | 1818 | 1685 | ||||
| WBsf666038 | 11062 | 11038 | ||||
| WBsf666039 | 25200 | 25200 | ||||
| WBsf675060 | 3246 | 3271 | ||||
| WBsf677420 | 1828 | 1873 | ||||
| WBsf677421 | 2806 | 2827 | ||||
| WBsf677422 | 7217 | 7283 | ||||
| WBsf677423 | 16848 | 16856 | ||||
| WBsf677424 | 17407 | 17407 | ||||
| WBsf677425 | 26185 | 26185 | ||||
| WBsf677426 | 27096 | 27097 | ||||
| WBsf677427 | 29713 | 29727 | ||||
| WBsf677428 | 29770 | 29779 | ||||
| WBsf677429 | 30783 | 30915 | ||||
| WBsf677430 | 31215 | 31241 | ||||
| WBsf677431 | 40933 | 40974 | ||||
| WBsf677432 | 41976 | 42209 | ||||
| WBsf696532 | 7721 | 7687 | ||||
| WBsf698982 | 2473 | 2450 | ||||
| WBsf698983 | 3202 | 3160 | ||||
| WBsf698984 | 3282 | 3277 | ||||
| WBsf698985 | 8140 | 8140 | ||||
| WBsf698986 | 8914 | 8869 | ||||
| WBsf698987 | 15962 | 15962 | ||||
| WBsf698988 | 24405 | 24362 | ||||
| WBsf698989 | 27093 | 27030 | ||||
| WBsf698990 | 28082 | 27974 | ||||
| WBsf698991 | 28214 | 28214 | ||||
| WBsf698992 | 29654 | 29592 | ||||
| WBsf698993 | 30763 | 30657 | ||||
| WBsf698994 | 30838 | 30830 | ||||
| WBsf698995 | 31680 | 31673 | ||||
| WBsf698996 | 31856 | 31856 | ||||
| WBsf698997 | 31925 | 31922 | ||||
| WBsf698998 | 32023 | 31970 | ||||
| WBsf698999 | 39404 | 39303 | ||||
| WBsf699000 | 40789 | 40773 | ||||
| WBsf699001 | 41663 | 41663 | ||||
| WBsf699002 | 41935 | 41794 | ||||
| WBsf715100 | 28124 | 28275 | ||||
| WBsf715101 | 28316 | 28362 | ||||
| WBsf717030 | 40666 | 41042 | ||||
| WBsf717793 | 16573 | 16921 | ||||
| WBsf261677 | 10244 | 10539 | ||||
| Feature_data | C07E3:Polysome | 1 | 43815 | |||
| C07E3:TranscriptionallyActiveRegion | 1 | 43815 | ||||
| C07E3:ChIPSeqTF | 1 | 43815 | ||||
| C07E3:TRF | 1 | 43815 | ||||
| C07E3:Dust | 1 | 43815 | ||||
| C07E3:inverted | 1 | 43815 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | T09F3 | 43713 | ||||
| Overlap_left | VM02G9R | |||||
| Clone_left_end | C07E3 | 1 | ||||
| T09F3 | 43713 | |||||
| DB_info | Database | EMBL | NDB_AC | Z49908 | ||
| NDB_SV | Z49908.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Matthews P | ||||
| From_laboratory | HX | |||||
| Date_directory | 950226 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | C07E3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 2f59cbf6cfe567e9e7fa73a4cb01ff65 | ||||
| Status | Finished | 26 Feb 1995 00:00:00 | ||||
| Submitted | 23 Jun 1995 00:00:00 | |||||
| Annotated | 21 Jun 1995 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 6115 | ||
| Right | 6149 | |||||
| Interpolated_map_position | II | 2.47163 | ||||
| Assembly_tags | Clone left end | 1 | 4 | Start of C07E3 | ||
| 43713 | 43716 | Begining of T09F3 | ||||
| annotation | 11813 | 11857 | 45 bases not double stranded with +ve read. Negative strand terminated to confirm sequence. | |||
| 32083 | 32149 | This region not completely d.s. because of run of Gs (probably 22bp) preventing - d.s. from 32083 to 32133 (50bp) and + d.s. from 32153 to 32233 (80bp) In both cases, sequence confirmed by terminators on opposite strand | ||||
| 32150 | 32232 | This region not completely d.s. because of run of Gs (probably 22bp) preventing - d.s. from 32083 to 32133 (50 bp) and + d.s. from 32153 to 32233 (80 bp). In both cases, sequence confirmed by terminators on opposite strand. | ||||
| 43813 | 43816 | End of edit?!?!!! | ||||
| Method | Genomic_canonical |
