WormBase Tree Display for RNAi: WBRNAi00089270
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WBRNAi00089270 | Homol | Homol_homol | C52E12:RNAi | ||
---|---|---|---|---|---|
Sequence_info | DNA_text | ATGTCATCGGTTAAAGTAGCTGTACGTGTTCGCCCATTCAACCAACGGGAAATCTCGAACACTTCAAAATGTGTCCTTCAAGTAAATGGAAATACGACGACAATAAATGGTCATTCAATTAACAAGGAGAACTTCAGTTTCAATTTTGATCATTCATATTGGTCGTTTGCGAGGAATGACCCACATTTTATCACCCAAAAACAAGTATATGAAGAGCTCGGAGTTGAAATGTTGGAACACGCATTTGAAGGGTATAATGTCTGCATTTTTGCATACGGTCAAACAGGATCAGGAAAATCATATACAATGATGGGAAAAGCCAATGATCCAGATGAAATGGGTATAATTCCACGTTTGTGCAATGATTTATTTGCACGAATTGATAATAACAATGATAAAGATGTTCAATATTCTGTAGAGGTATCGTATATGGAAATTTATTGTGAACGAGTAAAAGATCTTCTGAATCCTAACTCTGGAGGTAACCTAAGGGTTCGTGAACATCCTTTACTTGGACCTTACGTCGATGACCTTACCAAAATGGCAGTTTGTTCTTACCACGACATTTGCAATCTGATGGACGAAGGAAATAAAGCGAGAACTGTTGCTGCAACAAATATGAATTCGACATCATCAAGATCCCATGCGGTATTCACAATAGTACTCACTCAAAAAAGACATTGTGCTGATTCTAATTTGGATACTGAGAAGCATTCAAAAATTTCTTTGGTTGATTTGGCAGGATCCGAAAGAGCCAATTCTACAGGAGCGGAAGGTCAACGACTAAAAGAAGGAGCAAATATCAACAAGAGCTTGACAACGTTGGGTCTTGTAATCAGTAAACTTGCAGAAGAATCAACAAAGAAGAAAAAGTCCAACAAAGGTGTGATTCCTTATCGTGATTCTGTGCTGACGTGGCTTCTGAGAGAAAATCTGGGAGGAAATTCGAAAACTGCGATGCTCGCGGCATTATCTCCAGCTGATATTAACTTTGATGAAACACTGAGTACTTTGAGATATGCCGATAGAGCGAAACAAATTGTTTGTCAAGCAGTTGTTAATGAGGATCCAAATGCAAAACTTATTCGTGAACTCAATGAAGAAGTTATCAAACTTCGTCACATTTTGAAAGATAAGGGAATTGATGTCACAGACGTACAGGAGACACCCGGAAAACACAAAAAAGGACCGAAATTGCCAGCTCATGTACATGAGCAACTTGAGAAGCTTCAAGAATCTGAGAAATTGATGGCTGAAATTGGAAAGACTTGGGAGCAGAAATTAATTCATACAGAAGAAATTAGAAAACAACGAGAGGAAGAACTTCGTGATATGGGTCTTGCGTGTGCAGAAGATGGAACAACATTAGGCGTATTTAGTCCAAAGAAGTTACCCCATTTAGTTAACTTGAATGAAGATCCATTGATGTCAGAGTGTCTCATATATTATCTTAAAGAAGGAGTAACTAGCGTCGGCCGCCCTGTAGCTGAACATCGTCCAGACATTCTCTTATCGGGAGAAGCGATTCTCGAATTACATTGTGAATTTATAAACGAAGATGGAAATGTGACATTGACAATGAAACCGAATGCATCTTGCTATATAAATGGAAAACAAGTGACAACTCCTACTGTATTACACACAGGATCTAGAGTTATTCTCGGTGAACATCACGTTTTCCGATATAATGATCCACAGGAAGCAAGGCAAAGCAGGCATAACTTGGCAGCAATAGCTGAACAACCAATTGATTGGAAATATGCTCAACAAGAACTTCTAGACAAACAAGGAATTGATCTAAAAGCAGATATGGAGAAGAAAATGTTAGAAATGGAATCTCAATACAGAAGAGAAAAAGTAGAATTGGAACAAAAAATGTATCATCAGACAAGGGAATATGAATCAATGATTGAAAATCTTCAAAAACAAGTGGATTTGGCACAATCTTATATATCTGGTGGTGGTTCTATTTGGGAAGGAGAACGAATGTTGACGTCATCTTTACTTGAATTCCCGGAAGAGTTAAAATGGACATCAGATCAAAAACGAGTTGTACTAAAAGCTGCAATCAAATGGAGATATCATCAATTCACATCTGTTCGAGATGATCTTTGGGGAAATGCTATTTTTGTGAAGGAAGCGAATGCGATTTCAGTTGAACTCAAGAAAAAAGTTCAATTCCAATTTGCTCTGCTAACCGATACAATGTACAGCCCACTGCCACCTGATCTATTGCCACCAGGAGAAGACTTAACCCTTCGTCCATATCCAAAAACTGTTGTCGCTATTCAAGTTCAAGATCTAAAAAATGGAGCAACTCATTACTGGAGCATTGAAAAATTAAAGCAACGTCTCGAGGACATGCGTATCTTCTACAATTCGGAACTTTCTGTTGCTGGAACACCAGTTGATGTTCCATATCCTCCAGTTGCTGAAGGATGGCTAGCTGCTTTGAATCGAAATTCGGCACGTCTTATTCCCGACAGACAACGATTGGAAGCAATGCGTGATATGTATGAAACTGATGCAGAAATGTCGCCAGCTGATGGAGATCCAATGATGGATGCTTTAATGGGAACTGATCCATTTTATGATCGATTCCCATGGTTTCGAATGGTTGGAAGAGCATTCGTTTATTTGAATAACTTATTGCATAATGTTCCTCTCATTCATAAAGTAGCAGTTGTCAATGAAAAAGGAGAAGTGAAGGGTTATCTGAAAGTTGCCATCGAACCGGTTCAAAAAGATGAAGTGATCAATCAAAAGAAAGGTGTTCGACAAACAGCAAAGCTTCATTTCAGAAAAGAGGATTTCCTGAAATCACATAAAAATGGAGAAACTTCTGATTCTGATGCTCTCGCATTTCCTGAACACATGCAAGAGGAAGTAGAATTCTGTTTCCGTGTAGTCGTTCTACAAGCCATTGACGTGGCAGACACATATTCTGATGTTTTCTGTCAATTCAATTTCTTGCACCGCCATGATGAAGCCTTCTCAACGGAGCCAATGAAAAACTCAAAATCTCCATTAACATTCGAACACACCCAAAATCTTCACATCAAAATGAGCAAGACATTCCTTCATTATCTCCATCATTTCCCAATCATTTTCGAGGTATTTGGACATTTCCAACCAAAAAGTGAACAGTTCAATTTCGAAAGACAAAATAGTGCTCTTGGCAGACGACTGAGCACAAAATTGACATTCCAACAGCCGAGTTTGGTTATTTCAACTCCTGTCAAGAGCAAAAAAGCAAATGCACCAATTCAGAACAATAACGCATCTGTTAAATCAAAACATGATCTTCTTGTGTGGTTCGAAATTTGTGAATTGGCAAATAATGGAGAATATGTTCCAACAATAGTTGATCATGCTCAAGGACTTCCAACTCATGGAATATTTTTACTTCATCAAGGAATTCAACGTAGAATTAAAATCACAATATGCCATGAAAAAGGAGAATTGAAATGGAAAGATTGTCAAGAACTAGTTGTTGGACGTATTCGAGCTGGACCTGAATGGGCTGGCGGAGATGATGTTGATGTTTTATCACTTGGTCTATTCCCTGGAACATTTATGGAATTCTCAATGGATGACAGAACATTCTTCCAATTTGAAGCTGCCTGGGATTCTTCTCTTCATAACTCTCCACTTTTGAATCGAGTTTCGAATTACGGTGATCAAATTTACATGACACTTTCCGCTTATATGGAACTCGATGGATGTGCTCAACCAGCTGTTGTTACTAAAGATCTTTGTCTATTGATCTATGCAAGAGACTCGAAGATCTCAGCTGCCAGTCGTTTCTGTCGATCATTGGTCGGAGGAATTTCAAAATCTCCAGAAATGAACCGTGTCCCAGGAGTGTATCAACTGTGCCTGAAGGATGGATCCGACTCAGGTGCAATTCGTCGACAACGTCGTGTACTTGACACCTCATCAGCCTATGTTCGAGGAGAAGAGAATCTCGGACAATGGAGACCACGTGGAGATTCTCTTATCTTTGAGCATCAGTGGGAATTGGAAAAACTGACACGATTACAACAAGTCGAAAGAGTTCGATTATTCCTGAGACTTCGTGATCGACTGAAAGGAAAGAAGAATAAGGGAGAAGCGAGAACACCAGTTAGTCCATGTGATCCAGTTTGTGCAATTCCGGAAAGTATCAAGTTAGACGAGAAAGATAAAGGAATTGTTGGTAAAGTGCTTGGATTAATCAGAAGAAAGATTCCAATGAACAAGGATCCACCAACTGGAAACAAAGCTCAAGAATTGAGTGATGAAAGTGGATCAAATAGTATAACATCTCCAGTGTCTGATAAATCCTTGATCAAATCCTCTCGATCTTCGGATCTCCTGTGCCGACAGAAATCAAAATCCGATCAGAACCTTGCATCAAATGATGATATAGTTGATAATTTAGGAGGAATGAAACGAAGTTTGAGTGGATCACGAATTCTTCAACTCAATATTTTAGTGCCAGAAGTACTTGAAGAAAGAGTTGGAGTTGTTGTTTCAAAGAAAGGATATATGAATTTCTTGGAAGAAAAGACTCAAGGATGGACTCGTCGATGGGTTATTGTTCGTCGTCCATATATTCTTTTATTCCGTGATGATCGAGATTTGGTTATTCGAGGAATCATTAATCTGGCAAATGCTAGAATTGAACATTCGGAAGATCAACAAGCAATGGTGAAAGTACCAAATACTTTCAGTGTTTGCACTAATCAACGTGGATTCCTTATGCAAATGATGCCGGGCGATGAGATGTATGATTGGCTGTACGCAATCAATCCATTGATGGCTGGACAAATGAAATTACATGGAAATCAAAATGGAACAACATTGAAATCTCCAACATCATCATCTTCAATTGCTGCTTCATAA | |||
Experiment (3) | |||||
Inhibits | Predicted_gene | C52E12.2b | Inferred_automatically | RNAi_primary | |
C52E12.2a | Inferred_automatically | RNAi_primary | |||
Gene | WBGene00006831 | Inferred_automatically | RNAi_primary | ||
Transcript | C52E12.2a.2 | Inferred_automatically | RNAi_primary | ||
C52E12.2b.1 | Inferred_automatically | RNAi_primary | |||
C52E12.2a.1 | Inferred_automatically | RNAi_primary | |||
Species | Caenorhabditis elegans | ||||
Reference | WBPaper00039901 | ||||
Phenotype_not_observed | WBPhenotype:0001661 | Remark | Did not show a 2 AWC ON phenotype. However was able to enhance the 2 AWC-ON frequency from 34 to 58 percent in tir-1(ky388ts) at 15C. | ||
Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation C52E12.2b. | ||||
Method | RNAi |