WormBase Tree Display for Pseudogene: T10B5.2a
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| T10B5.2a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T10B5 | ||
| Structure | Source_exons | 1 | 34 | ||
| 309 | 1044 | ||||
| 1607 | 1739 | ||||
| 1789 | 1896 | ||||
| 1966 | 2070 | ||||
| 2162 | 2432 | ||||
| 3016 | 3112 | ||||
| 3158 | 3373 | ||||
| DB_info | DB_remark | coding pseudogene | |||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Type | Coding_pseudogene | ||||
| Attributes | SubType | unprocessed_pseudogene | |||
| Properties | Isoform | Curator_confirmed | WBPerson4025 | ||
| Visible | Gene | WBGene00020388 | |||
| Brief_identification | Pseudogene containing a Protein kinase-like domain | Curator_confirmed | WBPerson1983 | ||
| Corresponding_PCR_product | mv_K09C6.8 | ||||
| mv_T10B5.2 | |||||
| sjj2_T10B5.2 | |||||
| sjj_T10B5.2 | |||||
| sjj_T10B5.7 | |||||
| smd_T10B5.1 | |||||
| smd_T10B5.2 | |||||
| Corresponding_oligo_set | 180170_at | ||||
| Aff_T10B5.2 | |||||
| GPL8304_CE_WBGene00020388_A | |||||
| GPL8673_T10B5_2P00478 | |||||
| Variation (75) | |||||
| Microarray_results | SMD_T10B5.1 | ||||
| SMD_T10B5.2 | |||||
| SMD_T10B5.7 | |||||
| 180170_at | |||||
| Aff_T10B5.2 | |||||
| GPL8304_CE_WBGene00020388_A | |||||
| GPL8673_T10B5_2P00478 | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 08 Jun 2015 00:00:00 | WBPerson4025 | |||
| Remark | [20030109 po] split off T10B5.10 based on EST data(yk1257a06.3) | ||||
| [20031104 tb] merged T10B5.11 into this one based on OSTR187D7_1. | Curator_confirmed | WBPerson1849 | |||
| WBPerson1867 | |||||
| modified 5' and 3' ends based on sequence and est data. [20120131 tb] | Sequence_evidence | MM454_contig15970 | |||
| [150608 gw3] Took a look at this. It is missing the last exon when compared to the paralogs. It is a pseudogene. | Curator_confirmed | WBPerson4025 | |||
| Method | Pseudogene |
