WormBase Tree Display for Pseudogene: F56B3.3
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| F56B3.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56B3 | |||
| Structure | Source_exons | 1 | 74 | |||
| 264 | 333 | |||||
| 664 | 845 | |||||
| 1201 | 1468 | |||||
| 1787 | 1869 | |||||
| 1938 | 2020 | |||||
| 2089 | 2193 | |||||
| 2242 | 2349 | |||||
| DB_info | DB_remark | coding pseudogene | ||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Type | Coding_pseudogene | |||||
| Attributes | SubType | unprocessed_pseudogene | ||||
| Visible | Gene | WBGene00018929 | ||||
| Brief_identification | Pseudogene. | |||||
| Corresponding_PCR_product | cenix:121-c4 | |||||
| cenix:197-e9 | ||||||
| mv_F56B3.3 | ||||||
| mv_F56B3.9 | ||||||
| sjj_F56B3.3 | ||||||
| sjj_F56B3.9 | ||||||
| sjj_F58D12.1_2 | ||||||
| smd_F58D12.1_2 | ||||||
| Corresponding_oligo_set (19) | ||||||
| Variation (40) | ||||||
| Microarray_results (20) | ||||||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 15 Jan 2016 13:17:51 | WBPerson4025 | ||||
| Remark | modified 5' end based on est data. [20120410 tb] | Accession_evidence | NDB | FR831120 | ||
| [130819 gw3] Took a look at this. There is not much evidence for this. It looks dubious. | Curator_confirmed | WBPerson4025 | ||||
| [160115 gw3] Converted this from a CDS to a Pseudogene because when the structure is extended based on the RNASeq evidence, there is no valid coding structure. | Curator_confirmed | WBPerson4025 | ||||
| From_analysis | RNASeq | |||||
| Method | Pseudogene |
