WormBase Tree Display for Pseudogene: F42A6.4
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F42A6.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F42A6 | ||
Structure | Source_exons | 1 | 158 | ||
208 | 285 | ||||
457 | 578 | ||||
665 | 851 | ||||
904 | 1058 | ||||
1111 | 1207 | ||||
1394 | 1723 | ||||
1787 | 2165 | ||||
DB_info | DB_remark | coding pseudogene cyp-25A5 | |||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Type | Coding_pseudogene | ||||
Attributes | SubType | unprocessed_pseudogene | |||
Visible | Gene | WBGene00018326 | |||
Brief_identification | Curated pseudogene | ||||
Corresponding_PCR_product | TH:196-g8_1 | ||||
TH:219-b4_1 | |||||
TH:322H7_1 | |||||
TH:322H7_2 | |||||
cenix:196-g8_1 | |||||
cenix:219-b4_1 | |||||
cenix:322-h7 | |||||
mv_F42A6.4 | |||||
sjj_F42A6.4 | |||||
smd_F42A6.4 | |||||
Corresponding_oligo_set | A_12_P100026 | ||||
GPL3518_CE17056 | |||||
GPL8304_CE_WBGene00018326_A | |||||
GPL8673_F42A6_4P00036 | |||||
Variation (38) | |||||
Microarray_results | SMD_F42A6.4 | ||||
A_12_P100026 | |||||
GPL3518_CE17056 | |||||
GPL8304_CE_WBGene00018326_A | |||||
GPL8673_F42A6_4P00036 | |||||
RNASeq_FPKM (74) | |||||
Last_reviewed | 16 Sep 2013 00:00:00 | WBPerson4025 | |||
Remark | [130916 gw3] Converted this from a CDS to a Pseudogene as there is a STOP codon in the first exon when it is extended based on the RNASeq data. | Curator_confirmed | WBPerson4025 | ||
From_analysis | RNASeq_Hillier_elegans | ||||
Method | Pseudogene |