WormBase Tree Display for Operon: CEOP2709
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| CEOP2709 | SMap | S_parent | Canonical_parent | CHROMOSOME_II | |
|---|---|---|---|---|---|
| Species | Caenorhabditis elegans | ||||
| Contains_gene | WBGene00007633 | SL1 | Person_evidence | WBPerson71 | |
| Feature_evidence | WBsf022626 | ||||
| From_analysis | RNASeq_Hillier_elegans | ||||
| WBGene00012005 | SL1 | Feature_evidence | WBsf023060 | ||
| Description | C. elegans Deprecated Operon, this was previously seen as an active operon. | ||||
| Method | Deprecated_operon | ||||
| History | Deprecated | [110322 pad] Deprecated following 2010 re-analysis based on RNASeq data. | Person_evidence | WBPerson71 | |
| Curator_confirmed | WBPerson1983 | ||||
| Remark | (SL1-type) | Person_evidence | WBPerson71 | ||
| T24H10.7 and C16D2.1 represent an SL1-type operon | Person_evidence | WBPerson71 | |||
| [110322 pad] This operon has been re-assesed based on the modENCODE Waterston RNASeq data. The number of SL2 reads for each downstream gene in these operons does not achieve the 5% cutoff so has been removed from the operon set. | Person_evidence | WBPerson71 | |||
| Curator_confirmed | WBPerson1983 | ||||
| From_analysis | RNASeq_Hillier_elegans | ||||
| [110524 pad] This was classified as an SL1 type operon but has been deprecated based on re-analysis of the Waterston RNASeq data. | Person_evidence | WBPerson71 | |||
| Curator_confirmed | WBPerson1983 | ||||
| From_analysis | RNASeq_Hillier_elegans |
