WormBase Tree Display for Gene: WBGene00281717
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WBGene00281717 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-chn-1.3 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA43348 | ||||||||
Molecular_name | PPA43348 | ||||||||
PPA43348.1 | |||||||||
PP54727 | |||||||||
Public_name | Ppa-chn-1.3 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 24 Nov 2017 16:14:22 | WBPerson4055 | Event | Created | |||
2 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Ppa-chn-1.3 | ||||
3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Ppa-chn-1.3 | ||||
5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-chn-1.3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chn | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00280836 | ||||||||
00280837 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00092142 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00097627 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00114420 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00117732 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273592 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00276807 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00278157 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00279304 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00279311 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination. Is an ortholog of C. elegans chn-1. In C. elegans, chn-1 is involved in several processes, including determination of adult lifespan; egg-laying behavior; and protein ubiquitination. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA43348 | |||||||
Corresponding_transcript | PPA43348.1 | ||||||||
Other_sequence (19) | |||||||||
Remark | [190208 pad] The CGC name Ppa-chn-1.3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-chn-1.3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |