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WormBase Tree Display for Gene: WBGene00270402

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Name Class

WBGene00270402SMapS_parentSequencecb25.fpc0071c2
IdentityVersion1
NameSequence_nameCBG29974
Molecular_name (4)
Public_nameCBG29974
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00026665
Split_fromWBGene00026665
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00108799
WBVar00001167
WBVar00001172
WBVar00001162
WBVar00108798
RNASeq_FPKMWBls:00000020.069299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.084866From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.096125From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.134209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.109538From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.12991From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.231265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.040345From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.08069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.026897From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.078928From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.097735From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.214277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.039464From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.073301From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.022743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.054901From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.087058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.346873From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.27769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.02911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.124107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.126915From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.129722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.262562From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.76731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.448516From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.531217From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.771526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.36553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.47203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.07227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.15616From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.33262From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.69249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.27016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.276179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.98988From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.11421From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001010.087058From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.54483From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.085962From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.485383From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (40)
ParalogWBGene00030234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033374Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033750Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034137Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034138Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037512Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038152Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038153Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin fold and C-type lectin-like/link domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG29974
Corresponding_transcriptCBG29974.1
CBG29974.2
Experimental_infoExpr_patternExpr1050441
Microarray_resultsGPL14143_CBG03902_1394-1453_0.824_95_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene