WormBase Tree Display for Gene: WBGene00269355
expand all nodes | collapse all nodes | view schema
| WBGene00269355 | SMap | S_parent | Sequence | T28A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28A11.25 | |||||||
| Molecular_name | T28A11.25 | ||||||||
| T28A11.25.1 | |||||||||
| CE51200 | |||||||||
| Other_name | CELE_T28A11.25 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T28A11.25 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_T28A11.25 | |||||
| Panther | gene | CAEEL|Gene=T28A11.25|UniProtKB=A0A0S4XR99 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 26591695 | |||||||
| RefSeq | protein | NM_001318266.5 | |||||||
| TrEMBL | UniProtAcc | A0A0S4XR99 | |||||||
| UniProt_GCRP | UniProtAcc | A0A0S4XR99 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 02 Dec 2015 10:52:05 | WBPerson4025 | Event | Split_from | WBGene00020869 | ||
| Split_from | WBGene00020869 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | |||||
| CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP28.g9312 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g10337 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP29.g12915 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Enriched in anal sphincter muscle; body wall musculature; and muscle cell based on single-cell RNA-seq and microarray studies. Is affected by several genes including nuo-6; etr-1; and mrpl-2 based on RNA-seq and microarray studies. Is affected by nine chemicals including cyclobutrifluram; Camptothecin; and leptomycin B based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domains: T20D4.11-like domain; Domain of unknown function (DUF19); and Uncharacterised protein family UPF0376. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A11.25 | |||||||
| Corresponding_transcript | T28A11.25.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036059 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019363 | Inferred_automatically | RNAi_primary | |||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (69) | |||||||||
| Map_info | Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.3513 | |||||||
| Reference | WBPaper00066610 | ||||||||
| Method | Gene |
