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WormBase Tree Display for Gene: WBGene00267230

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Name Class

WBGene00267230SMapS_parentSequenceSRAE_chrX_scaffold2
IdentityVersion1
NameSequence_nameSRAE_X000165600
Molecular_nameSRAE_X000165600
SRAE_X000165600.1
SRP01293
Public_nameSRAE_X000165600
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067741.3767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
41.6678From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
47.1671From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
47.2124From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
47.3222From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
47.5083From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:000067810.2846From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
12.558From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
12.9178From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
3.81313From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
6.34234From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
8.25415From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
9.50204From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
9.80685From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
WBls:00006800.222584From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068211.8824From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00272648
00272649
00272650
00272651
00272652
Ortholog (54)
ParalogWBGene00256174Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257748Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260131Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264757Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264758Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267184Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans pmp-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000165600
Corresponding_transcriptSRAE_X000165600.1
Other_sequence (60)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
WBPaper00050919:down_parasitic_vs_free-living_mRNA
MethodGene