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WormBase Tree Display for Gene: WBGene00267133

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Name Class

WBGene00267133SMapS_parentSequenceSRAE_chrX_scaffold2
IdentityVersion1
NameSequence_nameSRAE_X000156000
Molecular_nameSRAE_X000156000
SRAE_X000156000.1
SRP07805
Other_name (17)
Public_nameSRAE_X000156000
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006771141.17From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
1143.98From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
1145.94From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
1156.6From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
1369.49From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
1370.68From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:0000678386.043From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
389.556From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
401.487From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
427.495From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
427.787From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
560.104From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
562.306From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
568.388From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:00006804435.06From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821011.53From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Ortholog (38)
ParalogWBGene00266551Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Autophagy protein Atg8 ubiquitin-like; Ubiquitin-like domain superfamily; and Autophagy protein Atg8 ubiquitin like. Is an ortholog of C. elegans lgg-1. In C. elegans, lgg-1 is involved in several processes, including dauer larval development; positive regulation of autophagosome assembly; and response to stress.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000156000
Corresponding_transcriptSRAE_X000156000.1
Other_sequence (180)
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene