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WormBase Tree Display for Gene: WBGene00258451

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Name Class

WBGene00258451SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000184100
Molecular_nameSRAE_1000184100
SRAE_1000184100.1
SRP03591
Other_nameSR02883Person_evidenceWBPerson2951
Public_nameSRAE_1000184100
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067712.3846From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
12.4701From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
12.7956From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
14.1007From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
14.6127From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
14.9338From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067810.1795From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
4.05049From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
6.34083From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
7.44293From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
7.92929From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
8.12279From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
8.49972From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
9.51602From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:0000680143.767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006824.25491From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00261151
OrthologWBGene00152750Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029931Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225050Brugia malayiFrom_analysisWormBase-Compara
WBGene00006741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128531Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240123Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00060181Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g3363Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14605Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g817Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13383Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g540Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6125Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16606Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6046Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8201Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11209Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold548.g3556Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00564.g12937Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03159Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_022255Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13275Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10399Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0011800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18376Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00289000Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00256618Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00256854Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257444Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257700Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262300Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264311Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264727Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264728Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264936Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266383Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans unc-1. In C. elegans, unc-1 is involved in positive regulation of cell communication by electrical coupling and response to xenobiotic stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000184100
Corresponding_transcriptSRAE_1000184100.1
Other_sequenceTMC00104_1
MI04460
SR02883
Tcol_isotig01394
Hbac_isotig03355
FC543268.1
GR14282
GRC04865_1
JI483454.1
GR12556
MHC01872_1
Acan_isotig03477
GE625831.1
GRC01511_1
FC546479.1
SSC00674_1
JI177387.1
AA934217.1
MIC02168_1
MIC00225_1
EY465970.1
CRC01759_1
JI179567.1
JI464406.1
Oden_isotig19605
AE03043
MIC06106_1
CB013627.1
MI00044
MH00499
BMC08123_1
Dviv_isotig26302
Acan_isotig03476
AW208319.1
ACC16992_1
FC554849.1
BG577698.1
ACC03411_1
JO472856.1
CV199822.1
TS00530
OOC01757_1
MI03113
AI055789.1
Hbac_isotig07583
OVC01181_1
AA680439.1
SRC01455_1
GRC00520_1
OOC02983_1
TSC06544_1
CBC09160_1
CJC00867_1
MI00206
EY461169.1
Tcol_isotig01393
JI463157.1
JI170454.1
AI692126.1
FC547668.1
SS02071
CK855343.1
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene