Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00257736

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00257736SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000113300
Molecular_nameSRAE_1000113300
SRAE_1000113300.1
SRP10282
Other_nameSR03597Person_evidenceWBPerson2951
Public_nameSRAE_1000113300
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067759.6319From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
61.2281From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
64.8553From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
66.235From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
66.8145From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
70.6002From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:0000678122.125From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
122.682From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
125.435From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
126.407From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
126.484From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
127.071From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
154.264From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
95.0084From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:000068011.7967From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.577098From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
Ortholog (30)
ParalogWBGene00258975Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259364Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260995Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264105Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264179Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265176Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Rho guanine nucleotide exchange factor, coiled-coil domain; SH3-like domain superfamily; Variant SH3 domain; SH3 domain; betaPIX coiled coil; and Dbl homology (DH) domain superfamily. Is an ortholog of C. elegans pix-1. In C. elegans, pix-1 is involved in gonad morphogenesis; inductive cell migration; and neuron migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000113300
Corresponding_transcriptSRAE_1000113300.1
Other_sequenceFC818802.1
SSC01697_1
SR03597
JI168838.1
SRC04588_1
Oden_isotig18589
SS00127
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
WBPaper00050919:up_parasitic_vs_free-living_mRNA
MethodGene