WormBase Tree Display for Gene: WBGene00195068
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| WBGene00195068 | SMap | S_parent | Sequence | Y48G8AL | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | Y48G8AL.16 | ||||||
| Molecular_name | Y48G8AL.16a | |||||||
| Y48G8AL.16a.1 | ||||||||
| CE44921 | ||||||||
| Y48G8AL.16b | ||||||||
| CE54288 | ||||||||
| Y48G8AL.16b.1 | ||||||||
| Other_name | CELE_Y48G8AL.16 | Accession_evidence | NDB | BX284601 | ||||
| Public_name | Y48G8AL.16 | |||||||
| DB_info | Database | WormFlux | gene | WBGene00195068 | ||||
| NDB | locus_tag | CELE_Y48G8AL.16 | ||||||
| NCBI | gene | 13179322 | ||||||
| RefSeq | protein | NM_001392921.1 | ||||||
| NM_001262043.2 | ||||||||
| TrEMBL | UniProtAcc | G4SS33 | ||||||
| A0A7R9XNC6 | ||||||||
| UniProt_GCRP | UniProtAcc | G4SS33 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 15 Apr 2010 10:21:59 | WBPerson1867 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (101) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog | CSP28.g10047 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||
| CSP28.g10048 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | |||||
| CSP29.g16615 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||||
| CSP39.g6138 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | |||||
| FL83_25088 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AFD; AIN; anchor cell; epithelial cell; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and isp-1 based on RNA-seq and microarray studies. Is affected by eleven chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | |||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | Y48G8AL.16a | ||||||
| Y48G8AL.16b | ||||||||
| Corresponding_transcript | Y48G8AL.16a.1 | |||||||
| Y48G8AL.16b.1 | ||||||||
| Other_sequence | CR08282 | |||||||
| Associated_feature | WBsf648933 | |||||||
| WBsf663758 | ||||||||
| Experimental_info | Expr_pattern | Expr1160416 | ||||||
| Expr2007697 | ||||||||
| Expr2025939 | ||||||||
| Microarray_results | A_12_P110611 | |||||||
| GPL19516_CGZ0047267 | ||||||||
| GPL21109_Y48G8AL.16 | ||||||||
| GPL8304_CE_WBGene00021690_A | ||||||||
| GPL8673_Y48G8AL_12P00002 | ||||||||
| GPL8673_Y48G8AL_12P00177 | ||||||||
| GPL9450_Y48G8AL.12 | ||||||||
| cea2.c.50255 | ||||||||
| Expression_cluster (83) | ||||||||
| Map_info | Positive | Positive_clone | Y48G8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | I | -16.4417 | ||||||
| Method | Gene |
