WormBase Tree Display for Gene: WBGene00193327

WBGene00193327 SMap: S_parent: Sequence: Cbre_Contig299
  Identity: Version: 6
    Name: CGC_name: Cbn-vit-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBN31362
      Molecular_name: CBN31362
        CBN31362.1
        CN34242
      Public_name: Cbn-vit-6
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-vit-6.1
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cbn-vit-6.1
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbn-vit-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vit
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.092991 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.185982 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 3.61217 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        3.90894 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        4.2057 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 22.9009 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        334.858 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00223851
      00223852
    Ortholog (43)
    Paralog: WBGene00140283 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00160603 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00164533 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191022 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00143644 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00193536 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Is an ortholog of C. elegans vit-6. In C. elegans, vit-6 is involved in negative regulation of protein oxidation; negative regulation of reactive oxygen species biosynthetic process; and positive regulation of cholesterol import. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBN31362
    Corresponding_transcript: CBN31362.1
    Other_sequence (32)
  Experimental_info: Microarray_results: GPL14142_CBN31362_907-966_0.944_3_C
      GPL14142_CBN31362_1307-1366_0.950_2_B
      GPL14142_CBN31362_1313-1372_0.958_1_A
  Remark: [190208 pad] The CGC name Cbn-vit-6.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-vit-6.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene