WormBase Tree Display for Gene: WBGene00139710

WBGene00139710 SMap: S_parent: Sequence: Cbre_Contig400
  Identity: Version: 2
    Name: CGC_name: Cbn-elt-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN00985
      Molecular_name: CBN00985
        CBN00985.1
        CN31004
      Public_name: Cbn-elt-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-elt-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: elt
    RNASeq_FPKM: WBls:0000002 0.383225 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.525451 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.667676 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        1.06291 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.06945 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.07213 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.27889 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        8.53346 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 19.3554 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        38.7108 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 1.26156 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1.86812 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.62428 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        2.78982 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        3.85679 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 5.31277 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        5.78507 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        6.25736 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 11.1386 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        11.3357 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        11.5329 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        13.1748 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        14.543 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        15.3335 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        26.8851 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        28.6238 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        29.8148 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        40.2623 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        42.923 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        5.55062 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        5.79821 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        6.06035 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        9.02781 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
      WBls:0000101 5.55062 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        9.94855 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00197549
      00197550
      00197551
      00197552
      00197553
    Ortholog: WBGene00001249 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039143 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072928 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119691 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g13177 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20021 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21165 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8082 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7948 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14542 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g994 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g28904 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20109 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-elt-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00186.g6571 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00616.g13607 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11898 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013472 Caenorhabditis remanei From_analysis: WormBase-Compara
      CBOVI.g8640 Caenorhabditis bovis From_analysis: WormBase-Compara
      chrIV_pilon.g11360 Caenorhabditis elegans From_analysis: WormBase-Compara
      Sp34_40340510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Csp11.Scaffold521.g2841 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      CSP39.g21032 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Pan_g22783 Panagrellus redivivus From_analysis: WormBase-Compara
      WBGene00089767 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00255925 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00143256 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00144874 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00149662 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00150364 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155594 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-1. In C. elegans, elt-1 is involved in several processes, including epidermal cell fate specification; regulation of transcription by RNA polymerase II; and spermatid development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBN00985
    Corresponding_CDS_history: CBN00985:np197
    Corresponding_transcript: CBN00985.1
    Other_sequence: CR10329
      Dviv_isotig14640
      Acan_isotig12119
      Dviv_isotig14639
  Method: Gene