WormBase Tree Display for Gene: WBGene00130353

WBGene00130353 SMap: S_parent: Sequence: Cjap.Contig18099
  Identity: Version: 2
    Name: CGC_name: Cjp-elt-6 From_analysis: Inferred_from_orthology
      Sequence_name: CJA11149
      Molecular_name: CJA11149
        CJA11149.1
        JA25668
      Public_name: Cjp-elt-6
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-elt-6
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: elt
    RNASeq_FPKM: WBls:0000004 48.718 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 26.8413 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.4728 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        8.24329 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        9.35804 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
      WBls:0000041 10.5855 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        11.0684 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        12.4172 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        12.57 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.11637 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        4.05897 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        4.56921 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        6.49617 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        8.11023 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        8.54084 From_analysis: RNASeq.japonica.WBls:0000041.control_median
      WBls:0000101 10.4728 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        12.2429 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00190197
      00190198
      00190199
      00190200
      00190201
    Ortholog (29)
    Paralog: WBGene00119691 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00125580 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00138069 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00120723 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136835 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CJA11149
    Corresponding_transcript: CJA11149.1
    Other_sequence: AYC03785_1
      JI171952.1
      Acan_isotig08607
      CJC00785_1
      CRC04851_1
      CJC07238_1
      FC546465.1
      CR10848
      JI461031.1
      AE04784
  Experimental_info: Expr_pattern: Expr1087275
    Microarray_results: GPL14145_CJA11149_1001-1060_0.940_1_B
      GPL14145_CJA11149_1165-1224_0.934_2_A
      GPL14145_CJA11149_896-955_0.866_18_C
  Method: Gene