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WormBase Tree Display for Gene: WBGene00126727

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Name Class

WBGene00126727SMapS_parentSequenceCjap.Contig3879
IdentityVersion3
NameCGC_nameCjp-syx-5From_analysisInferred_from_orthology
Sequence_nameCJA07523
Molecular_nameCJA07523
CJA07523.1
JA17709
Other_nameCjp-syn-3From_analysisInferred_from_orthology
Public_nameCjp-syx-5
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-syn-3
216 Apr 2010 14:36:35WBPerson2970Name_changeCGC_nameCjp-syx-5
Other_nameCjp-syn-3
329 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsyx
RNASeq_FPKMWBls:000000456.551From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002745.3151From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003834.4404From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
35.9813From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
37.5221From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004153.5079From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
54.0954From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
56.7781From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
57.7181From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
59.428From_analysisRNASeq.japonica.WBls:0000041.control_median
61.1378From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
61.2276From_analysisRNASeq.japonica.WBls:0000041.control_mean
63.0262From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
66.5146From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
77.0425From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:000010151.0499From_analysisRNASeq.japonica.total_over_all_stages.control_mean
56.551From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00187300
00187301
Ortholog (26)
ParalogWBGene00124669Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128918Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132467Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137450Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213742Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCJA07523
Corresponding_transcriptCJA07523.1
Other_sequence (50)
Experimental_infoExpr_patternExpr1075624
Microarray_resultsGPL14145_CJA07523_1016-1075_0.952_5_C
GPL14145_CJA07523_837-896_0.919_14_A
GPL14145_CJA07523_986-1045_0.949_6_B
MethodGene