WormBase Tree Display for Gene: WBGene00113305
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WBGene00113305 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Identity | Version | 7 | ||||
Name | CGC_name | Ppa-lgc-4 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA23751 | |||||
Molecular_name | PPA23751 | |||||
PPA23751.1 | ||||||
PP60186 | ||||||
Other_name | GENEPREDICTION_SNAP300000080637 | |||||
GENEPREDICTION_SNAP300000080651 | ||||||
GENEPREDICTION_SNAP300000080652 | ||||||
UMM-S57-4.1 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-lgc-4 | |||||
Species | Pristionchus pacificus | |||||
History (2) | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | lgc | |||||
RNASeq_FPKM | WBls:0000032 | 6.3356 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 1.06884 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
2.46815 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||
GO_annotation | 00178782 | |||||
00178783 | ||||||
00178784 | ||||||
00178785 | ||||||
00178786 | ||||||
00178787 | ||||||
00178788 | ||||||
Ortholog (27) | ||||||
Paralog (120) | ||||||
Structured_description | Automated_description | Predicted to enable extracellular ligand-gated monoatomic ion channel activity; symporter activity; and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-4. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | |||||
Date_last_updated | 24 Apr 2024 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA23751 | ||||
Corresponding_transcript | PPA23751.1 | |||||
Other_sequence (44) | ||||||
Experimental_info | Microarray_results (13) | |||||
Remark | [190208 pad] The CGC name Ppa-lgc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-lgc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |