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WormBase Tree Display for Gene: WBGene00112188

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Name Class

WBGene00112188SMapS_parentSequencePPA_ChrII
IdentityVersion2
NameCGC_namePpa-mut-7From_analysisInferred_from_orthology
Sequence_namePPA22634
Molecular_namePPA22634
PPA22634.1
PP69232
Other_nameGENEPREDICTION_SNAP300000079375
UMM-S10-90.0Person_evidenceWBPerson606
Public_namePpa-mut-7
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-mut-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmut
RNASeq_FPKMWBls:000003214.4916From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001015.70465From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.73208From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178202
00178203
00178204
Ortholog (12)
ParalogWBGene00092818Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110596Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272340Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277227Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable 3'-5' exonuclease activity and nucleic acid binding activity. Predicted to be involved in nucleobase-containing compound metabolic process. Is an ortholog of C. elegans mut-7. In C. elegans, mut-7 is involved in olfactory learning and regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSPPA22634
Corresponding_transcriptPPA22634.1
Other_sequencePPC02472_1
PP02314
Experimental_infoMicroarray_resultsGPL14372_Probes_63923
GPL14372_Probes_63924
GPL14372_Probes_63925
GPL14372_Probes_63926
GPL14372_Probes_63927
GPL14372_Probes_63928
GPL14372_Probes_63929
GPL14372_Probes_63930
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene