WormBase Tree Display for Gene: WBGene00111173
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WBGene00111173 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||||
Name | CGC_name | Ppa-pigk-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA21619 | ||||||||
Molecular_name | PPA21619 | ||||||||
PPA21619.1 | |||||||||
PP57382 | |||||||||
Other_name | GENEPREDICTION_SNAP300000078138 | ||||||||
GENEPREDICTION_SNAP300000082334 | |||||||||
UMM-S442-2.106 | Person_evidence | WBPerson606 | |||||||
Ppa-snr-6 | From_analysis | Inferred_from_orthology | |||||||
Ppa-hpo-4 | From_analysis | Inferred_from_orthology | |||||||
Public_name | Ppa-pigk-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00115033 | ||||
3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-hpo-4 | ||||
Other_name | Ppa-snr-6 | ||||||||
4 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-pigk-1 | ||||
Other_name | Ppa-hpo-4 | ||||||||
Acquires_merge | WBGene00115033 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pigk | ||||||||
RNASeq_FPKM | WBls:0000032 | 20.0174 | From_analysis (3) | ||||||
WBls:0000101 | 20.0174 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
21.3081 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
43.907 | From_analysis (3) | ||||||||
GO_annotation | 00177711 | ||||||||
00177712 | |||||||||
00177713 | |||||||||
00177714 | |||||||||
00177715 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00304833 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Predicted to enable GPI-anchor transamidase activity. Predicted to be involved in attachment of GPI anchor to protein and proteolysis. Predicted to be part of GPI-anchor transamidase complex. Is an ortholog of C. elegans pigk-1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA21619 | |||||||
Corresponding_transcript | PPA21619.1 | ||||||||
Other_sequence (99) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_42338 | |||||||
GPL14372_Probes_42340 | |||||||||
GPL14372_Probes_42341 | |||||||||
GPL14372_Probes_63524 | |||||||||
GPL14372_Probes_63525 | |||||||||
GPL14372_Probes_63526 | |||||||||
Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
WBPaper00041466:PP_germline-ablation_regulated | |||||||||
WBPaper00041606:PP_X.nematophila_regulated | |||||||||
Method | Gene |