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WormBase Tree Display for Gene: WBGene00107491

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Name Class

WBGene00107491SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameCGC_namePpa-smc-3From_analysisInferred_from_orthology
Sequence_namePPA17937
Molecular_namePPA17937
PPA17937.1
PP56765
Other_nameGENEPREDICTION_SNAP300000074640
UMM-S2874-8.62Person_evidenceWBPerson606
Public_namePpa-smc-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsmc
RNASeq_FPKMWBls:00000322.61628From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.24526From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.61628From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.11951From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00176005
00176006
00176007
00176008
00176009
Ortholog (36)
ParalogWBGene00089965Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098666Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109381Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112336Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114841Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203907Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in chromosome organization and protein homooligomerization. Predicted to be located in chromosome. Is an ortholog of C. elegans smc-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSPPA17937
Corresponding_transcriptPPA17937.1
Other_sequence (53)
Experimental_infoMicroarray_resultsGPL14372_Probes_73004
GPL14372_Probes_73008
MethodGene