WormBase Tree Display for Gene: WBGene00089767
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WBGene00089767 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 7 | |||||||
Name | Sequence_name | PPA00213 | |||||||
Molecular_name | PPA00213 | ||||||||
PPA00213.1 | |||||||||
PP61840 | |||||||||
Other_name | GENEPREDICTION_SNAP300000057343 | ||||||||
GENEPREDICTION_SNAP300000057344 | |||||||||
UMM-S57-30.53 | Person_evidence | WBPerson606 | |||||||
Ppa-end-3 | From_analysis | Inferred_from_orthology | |||||||
Public_name | PPA00213 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 18 Nov 2010 11:54:47 | WBPerson2970 | Name_change | CGC_name | Ppa-elt-7 | ||||
3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00089768 | ||||
4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
5 | 04 Feb 2020 15:43:56 | WBPerson1983 | Name_change | CGC_name | Ppa-end-3 | ||||
6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-elt-7 | ||||
Other_name | Ppa-end-3 | ||||||||
7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Acquires_merge | WBGene00089768 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00167821 | ||||||||
00167822 | |||||||||
00167823 | |||||||||
00167824 | |||||||||
00167825 | |||||||||
Ortholog (34) | |||||||||
Paralog | WBGene00091094 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00101853 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273964 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00276968 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-1; elt-7; and end-3. In C. elegans, end-3 is involved in endodermal cell fate specification and mesodermal cell fate specification. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA00213 | |||||||
Corresponding_transcript | PPA00213.1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_9574 | |||||||
GPL14372_Probes_9575 | |||||||||
GPL14372_Probes_9576 | |||||||||
GPL14372_Probes_9577 | |||||||||
GPL14372_Probes_9578 | |||||||||
GPL14372_Probes_9579 | |||||||||
GPL14372_Probes_9580 | |||||||||
GPL14372_Probes_9581 | |||||||||
GPL14372_Probes_9582 | |||||||||
GPL14372_Probes_9583 | |||||||||
Remark | [180319 gw3] The CGC name Ppa-elt-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
[210528 pad] The CGC name Ppa-elt-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |