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WormBase Tree Display for Gene: WBGene00074782

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Name Class

WBGene00074782SMapS_parentSequenceCrem_Contig61
IdentityVersion4
NameCGC_nameCre-clec-178From_analysisInferred_from_orthology
Sequence_nameCRE13500
Molecular_nameCRE13500
CRE13500.1
RP46086
Other_namecr01.sctg1617.wum.1
Public_nameCre-clec-178
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:46WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13500
Other_namecr01.sctg1617.wum.1
304 Jul 2008 11:06:46WBPerson4055Name_changeCGC_nameCre-clec-178
401 Nov 2011 16:17:20WBPerson2970EventAcquires_mergeWBGene00063973
Acquires_mergeWBGene00063973
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:000002411.0335From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
11.7005From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
12.061From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
12.1229From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
12.364From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
1.34637From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
13.5162From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
13.6442From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
1.37652From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
1.38276From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
13.9078From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
1.54125From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
16.9343From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
16.9404From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
17.1191From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
1.83158From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
18.6757From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
18.687From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
1.89805From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
1.96424From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
20.3555From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
22.1949From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
2.33739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
2.44538From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
2.47166From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
2.53955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
2.81738From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
2.83171From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
28.9321From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
2.89831From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
3.13812From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
3.20316From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
3.51559From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
3.94825From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
3.9666From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
4.02408From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
4.58879From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
4.61345From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
4.70775From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
4.82621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
4.87305From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
5.26531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
5.57617From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
5.58814From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
5.62669From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
6.04344From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
7.36497From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
7.36718From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
7.66427From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
8.67354From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
9.73212From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
WBls:000002713.9444From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.08093From_analysisRNASeq.remanei.WBls:0000027.control_median
4.16186From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.52657From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:00000381.36505From_analysisRNASeq.remanei.WBls:0000038.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
4.09516From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:000004110.2056From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.70733From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.17601From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.23935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.16619From_analysisRNASeq.remanei.WBls:0000041.control_median
4.8051From_analysisRNASeq.remanei.WBls:0000041.control_mean
6.09304From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.40927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:000006316.297From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBls:0000063.control_median
3.35619From_analysisRNASeq.remanei.WBls:0000063.control_mean
3.78267From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
4.99022From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
8.49205From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
WBls:00001010.853665From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.25361From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00020585Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039026Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00164601Caenorhabditis brenneriFrom_analysisOMA
WBGene00129425Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00204256Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g8769Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5157Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13642Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6382Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16536Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP39.g8186Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cni-clec-178Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_01100.g18387Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_24013Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013579Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g22715Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40226710Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10483Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00051377Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00052059Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057622Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058889Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065396Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068241Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Lectin C-type domain; C-type lectin-like; C-type lectin-like/link domain superfamily; and C-type lectin fold. Is an ortholog of C. elegans clec-178.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCRE13500
Corresponding_transcriptCRE13500.1
Other_sequenceCSC02074_1
CR09876
FD515873.1
JI216511.1
CRC03511_1
Experimental_infoExpr_patternExpr1102625
Microarray_resultsGPL14146_CRE13500_113-172_0.945_4_A
RemarkWBGene00063973 merged into this gene to tidy up gene class. WBGene00063973 was retired in WS193 following incorporation of the cr15 assembly and NGASP gene predictionsCurator_confirmedWBPerson2970
MethodGene