WormBase Tree Display for Gene: WBGene00058520

WBGene00058520 SMap: S_parent: Sequence: Crem_Contig27
  Identity: Version: 3
    Name: CGC_name: Cre-tap-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE15293
      Molecular_name: CRE15293
        CRE15293.1
        RP09410
      Other_name: cr01.sctg12.wum.28
      Public_name: Cre-tap-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-tap-1
        3 03 Jul 2008 11:45:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE15293
                Other_name: cr01.sctg12.wum.28
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tap
    RNASeq_FPKM: WBls:0000004 5.28792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        6.99012 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        8.69231 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 12.0076 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.40002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        15.285 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.86648 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        9.13978 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.93704 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 11.5599 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        12.7301 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.93788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        9.40929 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 3.35957 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.58242 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        4.53749 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        4.68526 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.68871 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.83303 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.00441 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        6.81532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 5.06675 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        6.19046 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148648
      00148649
    Ortholog (24)
    Paralog: WBGene00053497 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00061738 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062404 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064839 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064866 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065050 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00066278 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072658 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074978 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein serine/threonine phosphatase activity. Is an ortholog of C. elegans tap-1. In C. elegans, tap-1 is involved in endodermal cell fate specification and negative regulation of Ras protein signal transduction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CRE15293
    Corresponding_transcript: CRE15293.1
    Other_sequence: CBC06475_1
      Oden_isotig11376
      Oden_isotig11377
      Oden_isotig11375
      Tcol_isotig16260
      Oden_isotig11378
  Experimental_info: Expr_pattern: Expr1113616
    Microarray_results: GPL14146_CRE15293_147-206_0.872_30_B
      GPL14146_CRE15293_349-408_0.882_25_C
      GPL14146_CRE15293_425-484_0.918_12_A
  Method: Gene