WormBase Tree Display for Gene: WBGene00058297

WBGene00058297 SMap: S_parent: Sequence: Crem_Contig15
  Identity: Version: 3
    Name: CGC_name: Cre-tni-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07498
      Molecular_name: CRE07498
        CRE07498.1
        RP08564
      Other_name: cr01.sctg11.wum.137
      Public_name: Cre-tni-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-tni-1
        3 03 Jul 2008 11:45:17 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07498
                Other_name: cr01.sctg11.wum.137
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tni
    RNASeq_FPKM: WBls:0000004 10.126 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        7.96718 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        9.04659 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (53)
      WBls:0000027 151.538 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        161.72 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        179.474 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        197.228 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        218.258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        28.9465 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 116.698 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        138.611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        182.045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        29.4375 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 38.9341 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        39.2479 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        41.2561 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        47.3995 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        48.8111 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        53.5429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        57.3826 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        62.503 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 34.9109 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        59.6462 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148424
    Ortholog (32)
    Paralog: WBGene00056523 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070603 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00064039 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073643 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be part of troponin complex. Is an ortholog of C. elegans tni-1. In C. elegans, tni-1 is involved in backward locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CRE07498
    Corresponding_transcript: CRE07498.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1097262
    Microarray_results: GPL14146_CRE07498_253-312_0.888_14_C
      GPL14146_CRE07498_372-431_0.931_5_A
      GPL14146_CRE07498_71-130_0.887_16_B
  Method: Gene