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WormBase Tree Display for Gene: WBGene00056062

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Name Class

WBGene00056062SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-top-1From_analysisInferred_from_orthology
Sequence_nameCRE28566
Molecular_nameCRE28566
CRE28566.1
RP42916
Other_namecr01.sctg6.wum.141
Public_nameCre-top-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-top-1
303 Jul 2008 11:45:01WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28566
Other_namecr01.sctg6.wum.141
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtop
RNASeq_FPKMWBls:0000004317.903From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
324.388From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
330.872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.0684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
69.8429From_analysisRNASeq.remanei.WBls:0000027.control_mean
84.6813From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
85.9716From_analysisRNASeq.remanei.WBls:0000027.control_median
87.2619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
96.36From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003810.6665From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
48.3629From_analysisRNASeq.remanei.WBls:0000038.control_mean
60.3004From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
74.1219From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041109.178From_analysisRNASeq.remanei.WBls:0000041.control_mean
109.741From_analysisRNASeq.remanei.WBls:0000041.control_median
149.514From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
152.96From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
153.198From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
64.4101From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
65.0207From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
69.967From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010147.294From_analysisRNASeq.remanei.total_over_all_stages.control_median
75.7482From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00146299
00146300
00146301
00146302
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA topoisomerase type I (single strand cut, ATP-independent) activity. Predicted to be involved in DNA topological change. Predicted to be located in chromosome. Is an ortholog of C. elegans top-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCRE28566
Corresponding_transcriptCRE28566.1
Other_sequence (86)
Experimental_infoExpr_patternExpr1094127
Microarray_resultsGPL14146_CRE28566_1589-1648_0.918_22_C
GPL14146_CRE28566_1901-1960_0.946_6_B
GPL14146_CRE28566_2016-2075_0.955_1_A
MethodGene