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WormBase Tree Display for Gene: WBGene00055072

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Name Class

WBGene00055072SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-unc-16From_analysisInferred_from_orthology
Sequence_nameCRE25570
Molecular_nameCRE25570
CRE25570.1
RP47883
Other_namecr01.sctg4.wum.421
Public_nameCre-unc-16
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-unc-16
303 Jul 2008 11:44:54WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25570
Other_namecr01.sctg4.wum.421
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000418.882From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
21.5161From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
24.1502From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024114.856From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
117.283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
27.3532From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
27.9513From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
28.3092From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
32.4719From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
32.7113From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
32.9339From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
33.382From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
36.0963From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
36.5064From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
37.2577From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
37.297From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
37.7875From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
38.9603From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
39.5544From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
39.9909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
40.7232From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
41.3837From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
41.4071From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
41.9705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
42.8352From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
45.1616From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
45.8425From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
47.899From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
50.2932From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
51.3663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
51.5154From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
51.6219From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
51.7436From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
52.1418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
52.8386From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
53.8358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
55.5295From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
56.0555From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
58.8788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
60.3889From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
61.0073From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
63.4411From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
63.8049From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
64.6468From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
64.949From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
65.3065From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
65.4375From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
65.6655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
65.8735From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
66.9299From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
69.5463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
72.584From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
73.4994From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
79.9894From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
83.3869From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
84.8475From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
WBls:000002723.9105From_analysisRNASeq.remanei.WBls:0000027.control_mean
28.3614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
28.7267From_analysisRNASeq.remanei.WBls:0000027.control_median
29.0921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
33.857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.33139From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003821.6417From_analysisRNASeq.remanei.WBls:0000038.control_mean
26.4577From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
31.4774From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
6.98999From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004139.3318From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
40.5802From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
42.9669From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
45.0956From_analysisRNASeq.remanei.WBls:0000041.control_mean
45.1197From_analysisRNASeq.remanei.WBls:0000041.control_median
47.2724From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
48.9843From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
51.438From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:000006310.0353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
10.6453From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
11.5006From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
12.4278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
14.9549From_analysisRNASeq.remanei.WBls:0000063.control_median
15.193From_analysisRNASeq.remanei.WBls:0000063.control_mean
17.4819From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
20.3377From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
20.8913From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
21.0164From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
21.1962From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
6.3979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
WBls:000010121.1063From_analysisRNASeq.remanei.total_over_all_stages.control_median
24.0809From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00145162
OrthologWBGene00006755Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00031535Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00155354Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131083Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00227885Brugia malayiFrom_analysisWormBase-Compara
WBGene00208037Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212853Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245554Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00098027Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g4785Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11960Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g11962Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8331Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13081Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14075Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3247Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25794Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g11106Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16677Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28896Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8986Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3391Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10607Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10608Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-16Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18365Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00327.g9470Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07385Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009458Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03995Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7946Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30194800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00261014Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293684Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable MAP-kinase scaffold activity. Is an ortholog of C. elegans unc-16. In C. elegans, unc-16 is involved in several processes, including defecation; egg-laying behavior; and regulation of JNK cascade.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCRE25570
Corresponding_transcriptCRE25570.1
Other_sequenceACC06795_1
JO472375.1
Tcir_isotig28611
JI165046.1
FF678842.1
FK809211.1
FE911952.1
Dviv_isotig09852
BM00818
CRC04177_1
JI164967.1
JI479761.1
JI466840.1
FC552533.1
Tcol_isotig09960
HG00390
ES272948.1
JI482653.1
HBC04940_1
TM02073
TSC12465_1
CR08132
Tcol_isotig20122
SRC04651_1
JI170505.1
JO470038.1
JI476939.1
Acan_isotig07781
ACC21273_1
Dviv_isotig09853
JI461688.1
TMC01839_1
RSC01640_1
SSC03939_1
CRC02473_1
GW915713.1
Hbac_isotig02332
FC821946.1
AM744248.1
JI474292.1
Oden_isotig18789
JI481874.1
Oden_isotig27988
Oden_isotig19058
FC542608.1
CR08371
RS07074
Dviv_isotig22163
BMC13064_1
JI470548.1
FC552215.1
Dviv_isotig09854
SRC05276_1
FC552042.1
BXC05978_1
ASC01858_1
AS00685
OVC02991_1
SR03943
FE911058.1
BMC07339_1
SS01454
CJC00626_1
CRC01740_1
JI166846.1
OVC03630_1
EW741172.1
AW355767.1
SS02496
SSC00015_1
FK802446.1
JI472155.1
TDC03085_1
FC821330.1
HGC11317_1
JI462519.1
JI177924.1
FC819043.1
AW519333.1
JI483019.1
FC552232.1
Experimental_infoExpr_patternExpr1109083
Microarray_resultsGPL14146_CRE25570_2158-2217_0.852_57_C
GPL14146_CRE25570_2243-2302_0.845_63_A
GPL14146_CRE25570_3469-3528_0.944_4_B
MethodGene