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WormBase Tree Display for Gene: WBGene00052295

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Name Class

WBGene00052295SMapS_parentSequenceCrem_Contig5
IdentityVersion5
NameCGC_nameCre-odr-2From_analysisInferred_from_orthology
Sequence_nameCRE26977
Molecular_nameCRE26977
CRE26977.1
RP09317
Other_namecr01.sctg1.wum.181
cr01.sctg1.wum.181.3
cr01.sctg1.wum.181.2
Public_nameCre-odr-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-odr-2
303 Jul 2008 11:44:31WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE26977
Other_namecr01.sctg1.wum.181
403 Jul 2008 11:48:38WBPerson4055EventAcquires_mergeWBGene00052297
Name_changeOther_namecr01.sctg1.wum.181.3
503 Jul 2008 11:48:44WBPerson4055EventAcquires_mergeWBGene00052296
Name_changeOther_namecr01.sctg1.wum.181.2
Acquires_mergeWBGene00052297
WBGene00052296
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classodr
RNASeq_FPKMWBls:00000040.389905From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.77981From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.4316From_analysisRNASeq.remanei.WBls:0000027.control_median
14.9108From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
15.1291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
1.82802From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.95249From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
9.9551From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:00000380.925508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.54255From_analysisRNASeq.remanei.WBls:0000038.control_mean
6.87085From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
8.83128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.894027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.09031From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.5875From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.69653From_analysisRNASeq.remanei.WBls:0000041.control_median
2.9911From_analysisRNASeq.remanei.WBls:0000041.control_mean
3.80555From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
5.13571From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
5.43351From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630.927102From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1.41556From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
2.20486From_analysisRNASeq.remanei.WBls:0000063.control_mean
2.24945From_analysisRNASeq.remanei.WBls:0000063.control_median
3.08334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
3.24264From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
3.27264From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
4.42313From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
5.68416From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
WBls:00001012.45568From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.73935From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (26)
ParalogWBGene00064401Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00060395Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00063390Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00057627Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00078051Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00072991Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064047Caenorhabditis remaneiFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Caenorhabditis elegans ly-6-related and Caenorhabditis elegans ly-6-related protein. Is an ortholog of C. elegans odr-2. In C. elegans, odr-2 is involved in olfactory behavior and response to odorant.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCRE26977
Corresponding_transcriptCRE26977.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1102609
Microarray_resultsGPL14146_CRE26977_198-257_0.917_11_B
GPL14146_CRE26977_420-479_0.965_1_A
GPL14146_CRE26977_463-522_0.816_28_C
MethodGene